RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 FOXH1O75593 365 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 IGHV2-5P01817 119 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 LIPFP07098 398 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 OR8U8P0C7N1 319 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 GZMHP20718 246 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 USF1P22415 310 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-211ENST00000558890 SSTR5P35346 364 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 KIR2DS2P43631 304 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 GPR12P47775 334 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 GLIPR1P48060 266 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 FHITP49789 147 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 UBE2KP61086 200 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 ERVK-16P61578 105 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 RUNX1Q01196 453 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 TNFRSF9Q07011 255 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF816Q0VGE8 651 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-211ENST00000558890 RHEBQ15382 184 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 IZUMO4Q1ZYL8 232 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 Q3ZCU0 254 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 AKIRIN2Q53H80 203 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 AWAT1Q58HT5 328 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 LRRC10Q5BKY1 277 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 OR2B11Q5JQS5 317 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 SPANXN5Q5MJ07 72 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 FGFRL1Q8N441 504 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 KIR3DL3Q8N743 410 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 OR10A7Q8NGE5 316 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 GAFA1Q96PS6 74 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 AIFM2Q9BRQ8 373 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM147Q9BVK8 224 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 PARD6GQ9BYG4 376 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-211ENST00000558890 RBKSQ9H477 322 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 RPS10P5Q9NQ39 176 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.3□□□□□ -1.4
LRRC28-211ENST00000558890 OR6C3Q9NZP0 311 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 PSG11Q9UQ72 335 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 PRELID3BQ9Y3B1 194 aa6.3□□□□□ -1.4
LRRC28-211ENST00000558890 ARHGAP32A7KAX9 2087 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 IGHV3-43A0A0B4J1X8 118 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 IGHV4-61A0A0C4DH41 118 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 UBE2L5PA0A1B0GUS4 154 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 RBFOX3A6NFN3 312 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 C9JQL5 133 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 C15orf65H3BRN8 121 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 NDUFB3O43676 98 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 RBMXL2O75526 392 aaKnown RBP6.29□□□□□ -1.4
LRRC28-211ENST00000558890 TSPAN9O75954 239 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 S1PR2O95136 353 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 KRASP01116 189 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 IFNA1P01562 189 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SNRNP70P08621 437 aaKnown RBP6.29□□□□□ -1.4
LRRC28-211ENST00000558890 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 PPIAL4GP0DN37 164 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 IGHV3-43DP0DP04 118 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 CTRB1P17538 263 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 PAX6P26367 422 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 G6PCP35575 357 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 RAB7AP51149 207 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 EDDM3BP56851 147 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 LMO4P61968 165 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SERF2P84101 59 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SLC38A11Q08AI6 406 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-211ENST00000558890 ATP6V1FQ16864 119 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SOHLH1Q5JUK2 328 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 AVPI1Q5T686 147 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 CTRB2Q6GPI1 263 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 BTNL3Q6UXE8 466 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 Q6ZRM9 215 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 TPRX1Q8N7U7 411 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 MAPK1IP1LQ8NDC0 245 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SFT2D1Q8WV19 159 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 CORO2AQ92828 525 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
LRRC28-211ENST00000558890 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
LRRC28-211ENST00000558890 LINC00574Q9H8X3 128 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 DCAF16Q9NXF7 216 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 HSPB7Q9UBY9 170 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 TIMM9Q9Y5J7 89 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 LINC00312Q9Y6C7 94 aa6.29□□□□□ -1.4
LRRC28-211ENST00000558890 IGHV3OR15-7A0A075B7D8 119 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TRGV10A0A0A0MS01 117 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TRAV1-1A0A0B4J248 108 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 C17orf98A8MV24 154 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 B4DSR2 109 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 ITGB1BP1O14713 200 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 YPEL1O60688 119 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 LY6G6DO95868 133 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TFF1P04155 84 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 HSPB1P04792 205 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms