RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 SIGLEC8Q9NYZ4 499 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 KLK9Q9UKQ9 250 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 ZNF257Q9Y2Q1 563 aa12.98□□□□□ -0.33
LRRC28-210ENST00000558879 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 NPIPB5A8MRT5 1133 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 BMPR1BO00238 502 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 HRASP01112 189 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 IL6RP08887 468 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-210ENST00000558879 SYNJ2BPP57105 145 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 TAS2R20P59543 309 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
LRRC28-210ENST00000558879 POU2AF1Q16633 256 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 ZNF818PQ6ZRF7 136 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 SLC25A42Q86VD7 318 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 SLC25A46Q96AG3 418 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 S100A16Q96FQ6 103 aaKnown RBP12.97□□□□□ -0.33
LRRC28-210ENST00000558879 RSRP1Q9BUV0 290 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 SLC5A7Q9GZV3 580 aa12.97□□□□□ -0.33
LRRC28-210ENST00000558879 HUWE1Q7Z6Z7 4374 aaKnown RBP12.97□□□□□ -0.33
LRRC28-210ENST00000558879 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
LRRC28-210ENST00000558879 HMX3A6NHT5 357 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 CGB1A6NKQ9 187 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 FCER2P06734 321 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 FRMD6-AS1P0C7T7 363 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 NAT1P18440 290 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 CATR1Q13166 79 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 RPEL1Q2QD12 228 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 TMEM69Q5SWH9 247 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 ANKRD13BQ86YJ7 626 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 SBSPONQ8IVN8 264 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 SPAG16Q8N0X2 631 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 Q8N1Y9 231 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 SAMD12Q8N8I0 201 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 NECAP1Q8NC96 275 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 OR4A5Q8NH83 315 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 KCTD12Q96CX2 325 aaKnown RBP12.96□□□□□ -0.33
LRRC28-210ENST00000558879 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.33
LRRC28-210ENST00000558879 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 SLC2A9Q9NRM0 540 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
LRRC28-210ENST00000558879 DNAH7Q8WXX0 4024 aa12.96□□□□□ -0.34
LRRC28-210ENST00000558879 CRYGCP07315 174 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 CSN3P07498 182 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 TAS2R31P59538 309 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 FXYD4P59646 89 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 RPL8P62917 257 aaKnown RBP12.95□□□□□ -0.34
LRRC28-210ENST00000558879 OR4A47Q6IF82 309 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 C19orf35Q6ZS72 473 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 SSX9Q7RTT3 188 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 FUNDC2Q9BWH2 189 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 EHFQ9NZC4 300 aa12.95□□□□□ -0.34
LRRC28-210ENST00000558879 A8MZ25 164 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 OR2J3O76001 311 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 HPRT1P00492 218 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 EIF4EP06730 217 aaKnown RBP12.94□□□□□ -0.34
LRRC28-210ENST00000558879 FGF2P09038 288 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 CTRB1P17538 263 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 GNRHRP30968 328 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 NCS1P62166 190 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 C15orf32Q32M92 178 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 FAM209BQ5JX69 171 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 DHRS11Q6UWP2 260 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 MOB3AQ96BX8 217 aa12.94□□□□□ -0.34
LRRC28-210ENST00000558879 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
LRRC28-210ENST00000558879 SULT1C2O00338 296 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 MYOD1P15172 320 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 AREGP15514 252 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 NQO2P16083 231 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 HLA-GP17693 338 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 PSMB6P28072 239 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
LRRC28-210ENST00000558879 HERV-K104P61576 105 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 BORCS5Q969J3 196 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 FXYD6Q9H0Q3 95 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 COMMD9Q9P000 198 aa12.93□□□□□ -0.34
LRRC28-210ENST00000558879 H0Y980 276 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 S1PR2O95136 353 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 IGHV4-30-4P0DP06 118 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 RFX2P48378 723 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 TAS2R46P59540 309 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 OR2B8PP59922 312 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 ADAMTSL5Q6ZMM2 481 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 OR51H1Q8NH63 302 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 CD300LFQ8TDQ1 290 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 GPX8Q8TED1 209 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 ZNF2Q9BSG1 426 aaPredicted RBP12.92□□□□□ -0.34
LRRC28-210ENST00000558879 PLEKHA2Q9HB19 425 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 C19orf73Q9NVV2 129 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
LRRC28-210ENST00000558879 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
LRRC28-210ENST00000558879 IGLC7A0M8Q6 106 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms