RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 CMTM3Q96MX0 182 aa11.79□□□□□ -0.52
RPL28-207ENST00000558815 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
RPL28-207ENST00000558815 ANAPC10Q9UM13 185 aa11.79□□□□□ -0.52
RPL28-207ENST00000558815 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 RLN1P04808 185 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 MYOD1P15172 320 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 NAT1P18440 290 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
RPL28-207ENST00000558815 OR6F1Q8NGZ6 308 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 TMEM167AQ8TBQ9 72 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 MOB3AQ96BX8 217 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
RPL28-207ENST00000558815 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
RPL28-207ENST00000558815 TNCP24821 2201 aa11.78□□□□□ -0.52
RPL28-207ENST00000558815 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
RPL28-207ENST00000558815 ZNF182P17025 639 aaPredicted RBP11.77□□□□□ -0.53
RPL28-207ENST00000558815 GNRHRP30968 328 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 INSL3P51460 131 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 TSPAN5P62079 268 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 RHOGP84095 191 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 CD69Q07108 199 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 OR4A47Q6IF82 309 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 DHRS11Q6UWP2 260 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
RPL28-207ENST00000558815 LYSMD2Q8IV50 215 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 DMBX1Q8NFW5 382 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 BORCS5Q969J3 196 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 RSRP1Q9BUV0 290 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 EXTL2Q9UBQ6 330 aa11.77□□□□□ -0.53
RPL28-207ENST00000558815 E7EUB6 86 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 OR2J3O76001 311 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 S1PR2O95136 353 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 TRBV12-3P01733 135 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 ZP3P21754 424 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 RCVRNP35243 200 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 RPL8P62917 257 aaKnown RBP11.76□□□□□ -0.53
RPL28-207ENST00000558815 ZNF45Q02386 682 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
RPL28-207ENST00000558815 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 HAPLN4Q86UW8 402 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 USMG5Q96IX5 58 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 OR4C12Q96R67 309 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 SCPEP1Q9HB40 452 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 AKIP1Q9NQ31 210 aa11.76□□□□□ -0.53
RPL28-207ENST00000558815 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
RPL28-207ENST00000558815 TRAV3A0A0B4J244 114 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 TEX22C9J3V5 150 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 M0QYG6 137 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 RGS5O15539 181 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.53
RPL28-207ENST00000558815 PGLYRP1O75594 196 aaPredicted RBP11.75□□□□□ -0.53
RPL28-207ENST00000558815 HPRT1P00492 218 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 REG1AP05451 166 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
RPL28-207ENST00000558815 NQO2P16083 231 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 HLA-GP17693 338 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 MAS1LP35410 378 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 TAS2R31P59538 309 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 DCTN2Q13561 401 aaKnown RBP11.75□□□□□ -0.53
RPL28-207ENST00000558815 SPCS2Q15005 226 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 ZNF343Q6P1L6 599 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 SLC25A42Q86VD7 318 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 TTC9CQ8N5M4 171 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 AIFM2Q9BRQ8 373 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 ELOVL1Q9BW60 279 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
RPL28-207ENST00000558815 FAM223BA6NKX1 122 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 GPR31O00270 319 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 BRI3O95415 125 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 AREGP15514 252 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 SPNP16150 400 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 ERVK-16P61578 105 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 FAM223AQ8IWN6 122 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 OR4A5Q8NH83 315 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 TMEM140Q9NV12 185 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 ZNF257Q9Y2Q1 563 aa11.74□□□□□ -0.53
RPL28-207ENST00000558815 A0A1B0GW64 132 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 UPK2O00526 184 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 LPAR6P43657 344 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 OR52I2Q8NH67 350 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 CD300LFQ8TDQ1 290 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 B9D2Q9BPU9 175 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 COMMD9Q9P000 198 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 KLK11Q9UBX7 282 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
RPL28-207ENST00000558815 S4R3C0 116 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms