RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 VSTM2AQ8TAG5 236 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 ABHD5Q8WTS1 349 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 OR2A7Q96R45 310 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 FBXO7Q9Y3I1 522 aa13.75□□□□□ -0.21
TPM1-214ENST00000558544 MARCH11A6NNE9 402 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 ARPC1BO15143 372 aaKnown RBP13.74□□□□□ -0.21
TPM1-214ENST00000558544 NDUFB6O95139 128 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 IGKV1-39P01597 117 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 IGKV1D-39P04432 117 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 SERPINE2P07093 398 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 OR5AC1P0C628 307 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 AKR1C4P17516 323 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 G6PCP35575 357 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 ERVK-16P61578 105 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
TPM1-214ENST00000558544 POU2AF1Q16633 256 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 PRSS8Q16651 343 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 C10orf99Q6UWK7 81 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 AIFM2Q9BRQ8 373 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 FAM103A1Q9BTL3 118 aaKnown RBP13.74□□□□□ -0.21
TPM1-214ENST00000558544 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
TPM1-214ENST00000558544 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
TPM1-214ENST00000558544 CNIH1O95406 144 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 KRASP01116 189 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 FXYD3Q14802 87 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 TNXAQ16473 311 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 HIST2H2BDQ6DRA6 164 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 MZT2BQ6NZ67 158 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 ZNF562Q6V9R5 426 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 CENPVQ7Z7K6 275 aaPredicted RBP13.73□□□□□ -0.21
TPM1-214ENST00000558544 SGPP2Q8IWX5 399 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 C11orf44Q8N8P7 122 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 GRPEL2Q8TAA5 225 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 TMEM167AQ8TBQ9 72 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 WIPF2Q8TF74 440 aaPredicted RBP13.73□□□□□ -0.21
TPM1-214ENST00000558544 ARPC1AQ92747 370 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 ZNF747Q9BV97 191 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 BET1LQ9NYM9 111 aa13.73□□□□□ -0.21
TPM1-214ENST00000558544 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 CREBL2O60519 120 aaPredicted RBP13.72□□□□□ -0.21
TPM1-214ENST00000558544 IGF1P05019 195 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 UCP1P25874 307 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 ECSCRQ19T08 205 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 ZNF329Q86UD4 541 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 WSB1Q9Y6I7 421 aa13.72□□□□□ -0.21
TPM1-214ENST00000558544 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 TRAV3A0A0B4J244 114 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 G3V318 75 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 B3GALNT1O75752 331 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 EGR2P11161 476 aaPredicted RBP13.71□□□□□ -0.21
TPM1-214ENST00000558544 VDAC1P21796 283 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 SUPT4H1P63272 117 aaKnown RBP13.71□□□□□ -0.21
TPM1-214ENST00000558544 C10orf55Q5SWW7 151 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 OR5AU1Q8NGC0 362 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 SPATA3Q8NHX4 192 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 SEC22AQ96IW7 307 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 TMEM222Q9H0R3 208 aa13.71□□□□□ -0.21
TPM1-214ENST00000558544 TRAV41A0A0B4J266 112 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 ACTL6BO94805 426 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 CD28P10747 220 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 SLC6A1P30531 599 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 RPL8P62917 257 aaKnown RBP13.71□□□□□ -0.22
TPM1-214ENST00000558544 OR4A5Q8NH83 315 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 SGMS2Q8NHU3 365 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 LHFPL5Q8TAF8 219 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 ENKURQ8TC29 256 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 GLYATL2Q8WU03 294 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 CITED1Q99966 193 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 PRR13Q9NZ81 148 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 ZNF580Q9UK33 172 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 KCNIP3Q9Y2W7 256 aa13.71□□□□□ -0.22
TPM1-214ENST00000558544 UPK2O00526 184 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 FBXO24O75426 580 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 IL6RP08887 468 aaPredicted RBP13.7□□□□□ -0.22
TPM1-214ENST00000558544 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 MYOD1P15172 320 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 AKR1C2P52895 323 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 CRIP2P52943 208 aaPredicted RBP13.7□□□□□ -0.22
TPM1-214ENST00000558544 SLC35B1P78383 322 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 DHODHQ02127 395 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 CFHR3Q02985 330 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 TMEM187Q14656 261 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 TMEM128Q5BJH2 165 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 SLC25A42Q86VD7 318 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 LFNGQ8NES3 379 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 SRSF12Q8WXF0 261 aaKnown RBP13.7□□□□□ -0.22
TPM1-214ENST00000558544 GALNT14Q96FL9 552 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 PHB2Q99623 299 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 GON7Q9BXV9 100 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 C20orf85Q9H1P6 137 aa13.7□□□□□ -0.22
TPM1-214ENST00000558544 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 CDS2O95674 445 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 IGKV1-5P01602 117 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 OPN1MWP04001 364 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 APELAP0DMC3 54 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 OPN1MW2P0DN77 364 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 OPN1MW3P0DN78 364 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms