RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 TRBV6-7A0A0A0MS04 114 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 TEX22C9J3V5 150 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 TMEM50BP56557 158 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 P2RY14Q15391 338 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 HSD17B12Q53GQ0 312 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 PLET1Q6UQ28 207 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 OR56B1Q8NGI3 324 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 CSTL1Q9H114 145 aa13.14□□□□□ -0.31
TSPAN3-204ENST00000558394 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 MPTX1A8MV57 137 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 DIRAS3O95661 229 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 PSMB6P28072 239 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 GPR183P32249 361 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 PSMD7P51665 324 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 SETD9Q8NE22 299 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 OR11H2Q8NH07 326 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 C11orf68Q9H3H3 251 aaKnown RBP13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 SMPD3Q9NY59 655 aaPredicted RBP13.13□□□□□ -0.31
TSPAN3-204ENST00000558394 KBTBD11O94819 623 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 CRYGCP07315 174 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 MAS1LP35410 378 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 ARFRP1Q13795 201 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 OR2B11Q5JQS5 317 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 KCTD9Q7L273 389 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 C10orf67Q8IYJ2 551 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 CD300LFQ8TDQ1 290 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 CENPOQ9BU64 300 aa13.12□□□□□ -0.31
TSPAN3-204ENST00000558394 MFSD2BA6NFX1 497 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 FOXI3A8MTJ6 420 aaPredicted RBP13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 C11orf94C9JXX5 98 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 CDK1P06493 297 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 FCGR3AP08637 254 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 AREGP15514 252 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 CRHBPP24387 322 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 MFAP2P55001 183 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 VKORC1L1Q8N0U8 176 aa13.11□□□□□ -0.31
TSPAN3-204ENST00000558394 DNAH6Q9C0G6 4158 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 CD36P16671 472 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 RANBP1P43487 201 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 RAB11BQ15907 218 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 PLAC9Q5JTB6 97 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 OR4A5Q8NH83 315 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 THYN1Q9P016 225 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 APLNQ9ULZ1 77 aa13.1□□□□□ -0.31
TSPAN3-204ENST00000558394 E7EUB6 86 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 J3QRK9 145 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 SLC17A2O00624 439 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 S1PR2O95136 353 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 REG1AP05451 166 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 ZNF645Q8N7E2 425 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 TMEM167AQ8TBQ9 72 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 CYGBQ8WWM9 190 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 RAB3CQ96E17 227 aa13.09□□□□□ -0.31
TSPAN3-204ENST00000558394 PKHD1P08F94 4074 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 IGLV11-55A0A075B6I3 123 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 A0A1B0GVY2 172 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 PRSS29PA6NIE9 313 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 DEFB4AO15263 64 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 CD37P11049 281 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 RPA2P15927 270 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 ADMP35318 185 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 TALDO1P37837 337 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 SSX1Q16384 188 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 AHSA2Q719I0 299 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 ZNF502Q8TBZ5 544 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 TMEM190Q8WZ59 177 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 C20orf24Q9BUV8 137 aa13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 ZNF436Q9C0F3 470 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-204ENST00000558394 RAB27BO00194 218 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 CYB5BO43169 146 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 TGOLN2O43493 480 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 GADD45AP24522 165 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 KLK9Q2XQG4 91 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 S100A14Q9HCY8 104 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 KLK9Q9UKQ9 250 aa13.07□□□□□ -0.32
TSPAN3-204ENST00000558394 A0A075B6Q4 140 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 SLC22A5O76082 557 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 HRASP01112 189 aa13.06□□□□□ -0.32
TSPAN3-204ENST00000558394 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms