RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 POU2AF1Q16633 256 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 TMEM177Q53S58 311 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 TPTE2P1Q5T6R2 138 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 DTD1Q8TEA8 209 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 WFDC1Q9HC57 220 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 DPM3Q9P2X0 92 aa16.47■□□□□ 0.23
SNRPA1-205ENST00000558036 A0A1W2PPI3 338 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 FAM90A9PA6NNJ1 464 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 CEBPZOSA8MTT3 80 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 HTR2BP41595 481 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 DSCR9P59020 149 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 RPL23AP62750 156 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 UBA52P62987 128 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 SPANXN5Q5MJ07 72 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 MS4A7Q9GZW8 240 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 C15orf61A6NNL5 157 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 LEUTXA8MZ59 168 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 TXNL1O43396 289 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 OPN1MWP04001 364 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 OPN1MW2P0DN77 364 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 OPN1MW3P0DN78 364 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 RAB13P51153 203 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 CLINT1Q14677 625 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 UBQLN2Q9UHD9 624 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 NUP50Q9UKX7 468 aa16.46■□□□□ 0.23
SNRPA1-205ENST00000558036 ZANQ9Y493 2812 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 TIMM23O14925 209 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 METTL15P1P0C7V9 234 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 MC5RP33032 325 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 SSX2Q16385 188 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 DEFB113Q30KQ7 82 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 FAM74A1Q5RGS3 127 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 MAPK1IP1LQ8NDC0 245 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 SMIM8Q96KF7 97 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 POLR3KQ9Y2Y1 108 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 USF1P22415 310 aaPredicted RBP16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 CD24P25063 80 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 CNTFRP26992 372 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 AARDQ4LEZ3 155 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 SLC7A5P1Q8MH63 180 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 DYNAPQ8N1N2 210 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 SLC25A31Q9H0C2 315 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 TMEM14BQ9NUH8 114 aa16.45■□□□□ 0.22
SNRPA1-205ENST00000558036 MED6O75586 246 aa16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 IGLV2-23P01705 113 aa16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 IL6RP08887 468 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 DYNLT3P51808 116 aa16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 OR5C1Q8NGR4 320 aa16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 TPSG1Q9NRR2 321 aa16.44■□□□□ 0.22
SNRPA1-205ENST00000558036 UPK2O00526 184 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 TAAR5O14804 337 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 HINT2Q9BX68 163 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 SLC25A17O43808 307 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 KBTBD11O94819 623 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 TPT1P13693 172 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 ARHGDIBP52566 201 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 SPCS3P61009 180 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 ARL16Q0P5N6 197 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 ZNF429Q86V71 674 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 PUSL1Q8N0Z8 303 aaKnown RBP16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 STOML3Q8TAV4 291 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 OR4C12Q96R67 309 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 BET1LQ9NYM9 111 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 TCF19Q9Y242 345 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 FOXA2Q9Y261 457 aaPredicted RBP16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 OR51B2Q9Y5P1 312 aa16.43■□□□□ 0.22
SNRPA1-205ENST00000558036 SLC25A16P16260 332 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 CEACAM3P40198 252 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 LGALS4P56470 323 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 PAX8Q06710 450 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 STX12Q86Y82 276 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 BAP18Q8IXM2 172 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 IGHV3OR16-10A0A075B7F0 116 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 SULT1A1P50225 295 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 TAS2R30P59541 319 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 FBLN7Q53RD9 439 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 HAPLN4Q86UW8 402 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 SCARB1Q8WTV0 552 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 AIFM2Q9BRQ8 373 aa16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 BEX4Q9NWD9 120 aaPredicted RBP16.42■□□□□ 0.22
SNRPA1-205ENST00000558036 MSMBP08118 114 aa16.41■□□□□ 0.22
SNRPA1-205ENST00000558036 UBE2E1P51965 193 aa16.41■□□□□ 0.22
SNRPA1-205ENST00000558036 PJVKQ0ZLH3 352 aa16.41■□□□□ 0.22
SNRPA1-205ENST00000558036 HNF4GQ14541 408 aa16.41■□□□□ 0.22
SNRPA1-205ENST00000558036 TMED6Q8WW62 240 aa16.41■□□□□ 0.22
SNRPA1-205ENST00000558036 A0A096LNT2 108 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 HOXA1P49639 335 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 HSPE1P61604 102 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 BAXQ07812 192 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 Q5PR19 223 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 OR8G2PQ6IF36 304 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 OR52E5Q8NH55 327 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 CFHR4Q92496 578 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 PRNDQ9UKY0 176 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 VENTXO95231 258 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 SAA4P35542 130 aa16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 HEYLQ9NQ87 328 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 TET2Q6N021 2002 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-205ENST00000558036 CENPVL3A0A0U1RRI6 287 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms