RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 HMX3A6NHT5 357 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 E7EUB6 86 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 RBFOX2O43251 390 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEDD4-212ENST00000557845 APOA1P02647 267 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 PMP2P02689 132 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 IL6RP08887 468 aaPredicted RBP12.8□□□□□ -0.36
NEDD4-212ENST00000557845 SPNP16150 400 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 RORCP51449 518 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 HERV-K104P61576 105 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF45Q02386 682 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 CATR1Q13166 79 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 TMEM17Q86X19 198 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 ANKRD13BQ86YJ7 626 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 LYSMD2Q8IV50 215 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
NEDD4-212ENST00000557845 AKIP1Q9NQ31 210 aa12.8□□□□□ -0.36
NEDD4-212ENST00000557845 SORL1Q92673 2214 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 FAM223BA6NKX1 122 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 HPRT1P00492 218 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF735P0CB33 412 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 SMIM18P0DKX4 95 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 RPL27AP46776 148 aaKnown RBP12.79□□□□□ -0.36
NEDD4-212ENST00000557845 TAS2R31P59538 309 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 RHOGP84095 191 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 ATP5G2Q06055 141 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 OR4A47Q6IF82 309 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 FAM223AQ8IWN6 122 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 OR5H2Q8NGV7 314 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 OR4A5Q8NH83 315 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 GPX8Q8TED1 209 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 BORCS5Q969J3 196 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 FYTTD1Q96QD9 318 aaKnown RBP12.79□□□□□ -0.36
NEDD4-212ENST00000557845 NAA50Q9GZZ1 169 aaKnown RBP12.79□□□□□ -0.36
NEDD4-212ENST00000557845 SLC2A9Q9NRM0 540 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 BET1LQ9NYM9 111 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 ADAM30Q9UKF2 790 aa12.79□□□□□ -0.36
NEDD4-212ENST00000557845 A0A1B0GW64 132 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 HPGDSO60760 199 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
NEDD4-212ENST00000557845 GP9P14770 177 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 ELK1P19419 428 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 TAS2R46P59540 309 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 RPL8P62917 257 aaKnown RBP12.78□□□□□ -0.36
NEDD4-212ENST00000557845 CTF1Q16619 201 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 TATDN3Q17R31 274 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 NECAP1Q8NC96 275 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 OR6F1Q8NGZ6 308 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 OR51H1Q8NH63 302 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
NEDD4-212ENST00000557845 DPPA5A6NC42 116 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 NPIPB5A8MRT5 1133 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 PGLYRP1O75594 196 aaPredicted RBP12.77□□□□□ -0.37
NEDD4-212ENST00000557845 MYOD1P15172 320 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 NQO2P16083 231 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 HLA-DMAP28067 261 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 SYNJ2BPP57105 145 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 AADACL3Q5VUY0 350 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 IL34Q6ZMJ4 242 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 CD300LFQ8TDQ1 290 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 RSRP1Q9BUV0 290 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 PLEKHA2Q9HB19 425 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.37
NEDD4-212ENST00000557845 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.76□□□□□ -0.37
NEDD4-212ENST00000557845 OR2J3O76001 311 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 GABARAPO95166 117 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 CRYGCP07315 174 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 HLA-GP17693 338 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 PSMB6P28072 239 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 HRH1P35367 487 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 EXOSC2Q13868 293 aaKnown RBP12.76□□□□□ -0.37
NEDD4-212ENST00000557845 RPEL1Q2QD12 228 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 GPR107Q5VW38 600 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 MZT2AQ6P582 158 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 HAPLN4Q86UW8 402 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
NEDD4-212ENST00000557845 TRAV3A0A0B4J244 114 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 CGB1A6NKQ9 187 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 UPK2O00526 184 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 AREGP15514 252 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 TSPAN5P62079 268 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 DMBX1Q8NFW5 382 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 ASCL2Q99929 193 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 FBXL7Q9UJT9 491 aa12.75□□□□□ -0.37
NEDD4-212ENST00000557845 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 BMPR1BO00238 502 aa12.74□□□□□ -0.37
NEDD4-212ENST00000557845 GPR31O00270 319 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms