RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 CT55Q8WUE5 264 aa4.15□□□□□ -1.75
ZEB1-210ENST00000557827 ROPN1LQ96C74 230 aa4.15□□□□□ -1.75
ZEB1-210ENST00000557827 ABCG5Q9H222 651 aa4.15□□□□□ -1.75
ZEB1-210ENST00000557827 UTP11Q9Y3A2 253 aaKnown RBP4.15□□□□□ -1.75
ZEB1-210ENST00000557827 RIMS1Q86UR5 1692 aaKnown RBP4.15□□□□□ -1.75
ZEB1-210ENST00000557827 CACNA1SQ13698 1873 aa4.15□□□□□ -1.75
ZEB1-210ENST00000557827 ATG2BQ96BY7 2078 aa4.15□□□□□ -1.75
ZEB1-210ENST00000557827 DNMBPQ6XZF7 1577 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 A8MWP6 167 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 C9JCJ5 164 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 IGHV3-30-3P0DP02 117 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 NPPCP23582 126 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 CRABP1P29762 137 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 HSPE1P61604 102 aaKnown RBP4.14□□□□□ -1.75
ZEB1-210ENST00000557827 TBPL1P62380 186 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 RBX1P62877 108 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 C9orf64Q5T6V5 341 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 KPRPQ5T749 579 aaPredicted RBP4.14□□□□□ -1.75
ZEB1-210ENST00000557827 C3orf33Q6P1S2 294 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 Q6ZS49 121 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 PACRGLQ8N7B6 248 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 DAND5Q8N907 189 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 ERMAPQ96PL5 475 aaPredicted RBP4.14□□□□□ -1.75
ZEB1-210ENST00000557827 UPK3BQ9BT76 320 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 COMMD5Q9GZQ3 224 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 SNX12Q9UMY4 172 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 TOPBP1Q92547 1522 aa4.14□□□□□ -1.75
ZEB1-210ENST00000557827 VPS8Q8N3P4 1428 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 EP400Q96L91 3159 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 SCN10AQ9Y5Y9 1956 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 DOCK6Q96HP0 2047 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 ABCA10Q8WWZ4 1543 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 A0A0J9YY10 115 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 A0A1B0GX78 115 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 K7EM74 188 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 SLC17A3O00476 420 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 SERPINE1P05121 402 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 DNAH10OSP0CZ25 163 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 CST6Q15828 149 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 GLT8D1Q68CQ7 371 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 TMPPEQ6ZT21 453 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 OR13C6PQ8NH95 151 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 GINS3Q9BRX5 216 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 C11orf1Q9H5F2 150 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 ZNF835Q9Y2P0 537 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
ZEB1-210ENST00000557827 UFC1Q9Y3C8 167 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 RTL1A6NKG5 1358 aa4.13□□□□□ -1.75
ZEB1-210ENST00000557827 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 POLA1P09884 1462 aaPredicted RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 COLCA2A8K830 154 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 PLA2G10O15496 165 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 IGHV3-53P01767 116 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 CBR1P16152 277 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 KLF3P57682 345 aaPredicted RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 FKBP1AP62942 108 aaKnown RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 TNFRSF9Q07011 255 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 LGALS9BQ3B8N2 356 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 LGALS9CQ6DKI2 356 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 GOLT1AQ6ZVE7 132 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 GNPDA2Q8TDQ7 276 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 NMNAT3Q96T66 252 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 KLF6Q99612 283 aaPredicted RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 PYCARDQ9ULZ3 195 aa4.12□□□□□ -1.75
ZEB1-210ENST00000557827 ZNF443Q9Y2A4 671 aaPredicted RBP4.12□□□□□ -1.75
ZEB1-210ENST00000557827 KIF1BO60333 1816 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 MYH2Q9UKX2 1941 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 COL16A1Q07092 1604 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-210ENST00000557827 TRAV40A0A0B4J280 105 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 A0A1W2PQ67 120 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 IGSF23A1L1A6 192 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 S1PR2O95136 353 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 ZNF283Q8N7M2 679 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 OR11H1Q8NG94 326 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 OR11H6Q8NGC7 330 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 FNDC9Q8TBE3 224 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 RPS4Y2Q8TD47 263 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 ZHX1-C8orf76Q96EF9 292 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 WDR61Q9GZS3 305 aaKnown RBP4.11□□□□□ -1.75
ZEB1-210ENST00000557827 CISHQ9NSE2 258 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 TMEM56-RWDD3S4R434 201 aa4.11□□□□□ -1.75
ZEB1-210ENST00000557827 CDK12Q9NYV4 1490 aaPredicted RBP4.11□□□□□ -1.75
ZEB1-210ENST00000557827 TNRC18O15417 2968 aaPredicted RBP4.1□□□□□ -1.75
ZEB1-210ENST00000557827 PIRO00625 290 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 UBE2L6O14933 153 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SULT1A3P0DMM9 295 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SULT1A4P0DMN0 295 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SERPINB1P30740 379 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SMARCD3Q6STE5 483 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SDIM1Q6ZPB5 146 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
ZEB1-210ENST00000557827 MRPL30Q8TCC3 161 aaKnown RBP4.1□□□□□ -1.75
ZEB1-210ENST00000557827 SCRT1Q9BWW7 348 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms