RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FCN1O00602 326 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 RAMP3O60896 148 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 CA2P00918 260 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 IL6RP08887 468 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 IL7P13232 177 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 RPL8P62917 257 aaKnown RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 DHODHQ02127 395 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 CFHR3Q02985 330 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 RBMS2Q15434 407 aaKnown RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 BAK1Q16611 211 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 C2orf68Q2NKX9 166 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 CXorf66Q5JRM2 361 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 HSD17B13Q7Z5P4 300 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 SLC25A42Q86VD7 318 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 SDHCQ99643 169 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-234ENST00000557703 WNK1Q9H4A3 2382 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 SH2D7A6NKC9 451 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 ANXA3P12429 323 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 PPIFP30405 207 aaKnown RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 LPAR6P43657 344 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 UBE2MP61081 183 aaKnown RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF585BQ52M93 769 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM128Q5BJH2 165 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 C19orf54Q5BKX5 351 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 OR2B11Q5JQS5 317 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 FAAP20Q6NZ36 180 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 FAM219AQ8IW50 185 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 SGPP2Q8IWX5 399 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 DMBX1Q8NFW5 382 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 RTBDNQ9BSG5 229 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 C5orf66Q9H5L9 145 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 SLA2Q9H6Q3 261 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF430Q9H8G1 570 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 PARP11Q9NR21 331 aa10.76□□□□□ -0.69
SHMT2-234ENST00000557703 FOXA2Q9Y261 457 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-234ENST00000557703 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-234ENST00000557703 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 SNAPC5O75971 98 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 CDS2O95674 445 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 IGLV1-40P01703 118 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 UCP1P25874 307 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 PSMB8P28062 276 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 SRPXP78539 464 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM65Q6PI78 240 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 IL22RA2Q969J5 263 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 NOL4LQ96MY1 436 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-234ENST00000557703 GPHA2Q96T91 129 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM222Q9H0R3 208 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 NAA60Q9H7X0 242 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 PRNDQ9UKY0 176 aa10.75□□□□□ -0.69
SHMT2-234ENST00000557703 TET2Q6N021 2002 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-234ENST00000557703 TCRBV4S1A1TA0A5B7 111 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 UPK2O00526 184 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 S1PR2O95136 353 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-234ENST00000557703 HLA-GP17693 338 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 CDX1P47902 265 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-234ENST00000557703 KRTAP10-3P60369 221 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 PJVKQ0ZLH3 352 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 TNXAQ16473 311 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 MRGPRG-AS1Q2M3A8 158 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 PRR31Q5SQ13 230 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 MRPL41Q8IXM3 137 aaKnown RBP10.74□□□□□ -0.69
SHMT2-234ENST00000557703 OR4F17Q8NGA8 305 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 OR5B3Q8NH48 314 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 ABHD5Q8WTS1 349 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
SHMT2-234ENST00000557703 SEC22AQ96IW7 307 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 OR4F4Q96R69 305 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 CLCC1Q96S66 551 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 COMMD5Q9GZQ3 224 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
SHMT2-234ENST00000557703 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 ARPC1BO15143 372 aaKnown RBP10.73□□□□□ -0.69
SHMT2-234ENST00000557703 NDUFB6O95139 128 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 DHFRP00374 187 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 KRASP01116 189 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 CD28P10747 220 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 PI3P19957 117 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 SSBP2P81877 361 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-234ENST00000557703 NDPQ00604 133 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 FAM209BQ5JX69 171 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 H2BFWTQ7Z2G1 175 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF329Q86UD4 541 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 LFNGQ8NES3 379 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 GLYATL2Q8WU03 294 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 TPSG1Q9NRR2 321 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF257Q9Y2Q1 563 aa10.73□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM56-RWDD3S4R434 201 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms