RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RBKSQ9H477 322 aa11.63□□□□□ -0.55
ARHGEF40-208ENST00000557498 CACFD1Q9UGQ2 172 aa11.63□□□□□ -0.55
ARHGEF40-208ENST00000557498 PRNDQ9UKY0 176 aa11.63□□□□□ -0.55
ARHGEF40-208ENST00000557498 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
ARHGEF40-208ENST00000557498 HELZ2Q9BYK8 2649 aaKnown RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 CHST1O43916 411 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 OR2F2O95006 317 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 SPDEFO95238 335 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 MOSP00540 346 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 IGKV1D-33P01593 117 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 IGKV1-33P01594 117 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 OR2F1Q13607 317 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZNF345Q14585 488 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 KLF17Q5JT82 389 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZNF429Q86V71 674 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 RAB40CQ96S21 281 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 TMEM14BQ9NUH8 114 aa11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 ANKRD17O75179 2603 aaKnown RBP11.62□□□□□ -0.55
ARHGEF40-208ENST00000557498 A0A0D9SG52 128 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 MSGN1A6NI15 193 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 KCNAB3O43448 404 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 SLC25A17O43808 307 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 GPR137BO60478 399 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 CRYGBP07316 175 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 HKR1P10072 659 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 IAPPP10997 89 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 C4BPBP20851 252 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 CNTFRP26992 372 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 BRS3P32247 399 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 AP2S1P53680 142 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 SPCS3P61009 180 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 PSG5Q15238 335 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 PDLIM3Q53GG5 364 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 TMUB2Q71RG4 321 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 TEX45Q8NA69 505 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 EAF1Q96JC9 268 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 NUP50Q9UKX7 468 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 WNK2Q9Y3S1 2297 aa11.61□□□□□ -0.55
ARHGEF40-208ENST00000557498 A0A0U1RQK1 487 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 TMEM50AO95807 157 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 IFNA17P01571 189 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 FGF2P09038 288 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 CD24P25063 80 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 RPL12P30050 165 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 S100A11P31949 105 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 PAX9P55771 341 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 TAS2R30P59541 319 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 RPL23AP62750 156 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 RPL8P62917 257 aaKnown RBP11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 EBI3Q14213 229 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 HES1Q14469 280 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 FBLN7Q53RD9 439 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 Q8N6K4 173 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 SMIM8Q96KF7 97 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 LYRM2Q9NU23 88 aaPredicted RBP11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 FKBP11Q9NYL4 201 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 TCF19Q9Y242 345 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZNF257Q9Y2Q1 563 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 OR51B2Q9Y5P1 312 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 WSB1Q9Y6I7 421 aa11.6□□□□□ -0.55
ARHGEF40-208ENST00000557498 FAM24AA6NFZ4 105 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 NBR2O15453 112 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 FSHBP01225 129 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 BPIFB3P59826 476 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 OPCMLQ14982 345 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 MMDQ15546 238 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 SPINK9Q5DT21 86 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 NPBQ8NG41 125 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 CIB3Q96Q77 187 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 MEGF9Q9H1U4 602 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZNF430Q9H8G1 570 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 TPSG1Q9NRR2 321 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 PSENENQ9NZ42 101 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 SIGLEC9Q9Y336 463 aa11.59□□□□□ -0.55
ARHGEF40-208ENST00000557498 IGSF23A1L1A6 192 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 RRHO14718 337 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 BCL2L11O43521 198 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 TSC22D2O75157 780 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 NDUFA3O95167 84 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 LY86O95711 162 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 FAM106CPP0CH98 169 aa11.58□□□□□ -0.56
ARHGEF40-208ENST00000557498 MYOD1P15172 320 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms