RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CCL24O00175 119 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 BRI3O95415 125 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 RLN1P04808 185 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC00239-201ENST00000556973 RUNX1Q01196 453 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 POU2AF1Q16633 256 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 PHLDA2Q53GA4 152 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 OR5T1Q8NG75 326 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
LINC00239-201ENST00000556973 MS4A10Q96PG2 267 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 P2RX4Q99571 388 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF355PQ9NSJ1 428 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
LINC00239-201ENST00000556973 BET1LQ9NYM9 111 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 COMMD9Q9P000 198 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 PKD1L1Q8TDX9 2849 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ANKRD20A5PA0PJZ0 165 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 DISC1C4P0D8 188 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 I3L521 148 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 DUS4LO95620 317 aaKnown RBP8.31□□□□□ -1.08
LINC00239-201ENST00000556973 IL6RP08887 468 aaPredicted RBP8.31□□□□□ -1.08
LINC00239-201ENST00000556973 FGF2P09038 288 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 AKAIN1P0CW23 69 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 PGAM2P15259 253 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ECI1P42126 302 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 LPAR6P43657 344 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 SCGB2B2Q4G0G5 96 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF585BQ52M93 769 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ASPHD1Q5U4P2 390 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 OR4A47Q6IF82 309 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ETV3LQ6ZN32 361 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 SSX9Q7RTT3 188 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 TBC1D26Q86UD7 250 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 MRPL41Q8IXM3 137 aaKnown RBP8.31□□□□□ -1.08
LINC00239-201ENST00000556973 CADM3Q8N126 398 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 LINC00482Q8N8I6 264 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 DMBX1Q8NFW5 382 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 OR4D10Q8NGI6 311 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 ZFAND1Q8TCF1 268 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 RAX2Q96IS3 184 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 THAP7Q9BT49 309 aaPredicted RBP8.31□□□□□ -1.08
LINC00239-201ENST00000556973 HRASLSQ9HDD0 168 aa8.31□□□□□ -1.08
LINC00239-201ENST00000556973 A0A0G2JLM5 398 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 DPPA5A6NC42 116 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 G3V4G9 280 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 UPK2O00526 184 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 MPPED1O15442 326 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 S1PR2O95136 353 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 TRGV3P03979 118 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 OR9G9P0C7N8 305 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF735P0CB33 412 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 HLA-GP17693 338 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 RPL27AP46776 148 aaKnown RBP8.3□□□□□ -1.08
LINC00239-201ENST00000556973 TPPP2P59282 170 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 ERVK-16P61578 105 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 RND3P61587 244 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 RPL8P62917 257 aaKnown RBP8.3□□□□□ -1.08
LINC00239-201ENST00000556973 PYDC2Q56P42 97 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 SLC25A42Q86VD7 318 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 TTC9CQ8N5M4 171 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 OR11H1Q8NG94 326 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 RCC1LQ96I51 464 aaKnown RBP8.3□□□□□ -1.08
LINC00239-201ENST00000556973 DUX3Q96PT4 197 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 GNB4Q9HAV0 340 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 SLC2A9Q9NRM0 540 aa8.3□□□□□ -1.08
LINC00239-201ENST00000556973 MARCH11A6NNE9 402 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 KRASP01116 189 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 IGLL1P15814 213 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 ETV6P41212 452 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 PIGPP57054 158 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 DEFA6Q01524 100 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 OXLD1Q5BKU9 147 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 SPANXN2Q5MJ10 180 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 CCDC190Q86UF4 302 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 Q8N402 240 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 ADAD2Q8NCV1 583 aaKnown RBP8.29□□□□□ -1.08
LINC00239-201ENST00000556973 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 MARCH1Q8TCQ1 289 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 DPF1Q92782 380 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 OR5B12Q96R08 314 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 PRRT1Q99946 306 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
LINC00239-201ENST00000556973 TMEM140Q9NV12 185 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 COA4Q9NYJ1 87 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 V9GYH0 126 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 CMYA5Q8N3K9 4069 aa8.29□□□□□ -1.08
LINC00239-201ENST00000556973 C3orf85A0A1B0GTC6 90 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 C13orf42A0A1B0GVH6 325 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 HMX3A6NHT5 357 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 E7EUB6 86 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 B3GALNT1O75752 331 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 SNAPC5O75971 98 aa8.28□□□□□ -1.08
LINC00239-201ENST00000556973 HSPB1P04792 205 aaKnown RBP8.28□□□□□ -1.08
LINC00239-201ENST00000556973 SERPINE2P07093 398 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms