RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 NDUFB8O95169 186 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 MYL9P24844 172 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 ARL3P36405 182 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 RPL27AP46776 148 aaKnown RBP13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 OR4S2Q8NH73 311 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 TMEM167AQ8TBQ9 72 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 FANCD2OSQ96PS1 177 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 FYTTD1Q96QD9 318 aaKnown RBP13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 OR2A7Q96R45 310 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 SLC2A9Q9NRM0 540 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 MLXQ9UH92 298 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 S4R3C0 116 aa13.71□□□□□ -0.21
VIPAS39-209ENST00000556909 DPPA5A6NC42 116 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 A8MWP6 167 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 AREGP15514 252 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 RAB3BP20337 219 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 CRHBPP24387 322 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 EIF4EBP1Q13541 118 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 TBCEQ15813 527 aaPredicted RBP13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 CLEC19AQ6UXS0 136 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 PUSL1Q8N0Z8 303 aaKnown RBP13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 LINC00476Q8WZB0 136 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 GGTLC1Q9BX51 225 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 ATG5Q9H1Y0 275 aa13.7□□□□□ -0.22
VIPAS39-209ENST00000556909 SLC22A5O76082 557 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 CRYGCP07315 174 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 CTXN2P0C2S0 81 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 PSMB6P28072 239 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 MAS1LP35410 378 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 BRWD1-AS2P59051 145 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 ARL6IP1Q15041 203 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 ZNF367Q7RTV3 350 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 NR2C2APQ86WQ0 139 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 OR52B4Q8NGK2 314 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 TCTEX1D2Q8WW35 142 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 EEF1AKMT3Q96AZ1 226 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 OVOL2Q9BRP0 275 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 ST6GALNAC5Q9BVH7 336 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 NDUFB11Q9NX14 153 aa13.69□□□□□ -0.22
VIPAS39-209ENST00000556909 ZNF320A2RRD8 509 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 SCAF4O95104 1147 aaKnown RBP13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 CDNFQ49AH0 187 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 FAM106AQ4KMX7 169 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 HACD4Q5VWC8 232 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 UXS1Q8NBZ7 420 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 NUDCD2Q8WVJ2 157 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 SPATA2Q9UM82 520 aa13.68□□□□□ -0.22
VIPAS39-209ENST00000556909 LOC102724200A0A096LPH7 203 aaPredicted RBP13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 DHFRP00374 187 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 MYOD1P15172 320 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 CTRB1P17538 263 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 CTRB2Q6GPI1 263 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 CNIH2Q6PI25 160 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 BTNL8Q6UX41 500 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 TAS2R8Q9NYW2 309 aa13.67□□□□□ -0.22
VIPAS39-209ENST00000556909 KMT2AQ03164 3969 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 IGLV11-55A0A075B6I3 123 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 TRDV1A0A1B0GX56 115 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 SMIM30A4D0T7 59 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 TMEM235A6NFC5 223 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 MFSD2BA6NFX1 497 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 REG1AP05451 166 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 OR4A47Q6IF82 309 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 UNQ9165/PRO28630Q6UXU0 137 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 SSX9Q7RTT3 188 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 GPHA2Q96T91 129 aa13.66□□□□□ -0.22
VIPAS39-209ENST00000556909 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 RPL8P62917 257 aaKnown RBP13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 TM4SF20Q53R12 229 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 C22orf42Q6IC83 251 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 ZNF66Q6ZN08 573 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 MFSD4AQ8N468 514 aa13.65□□□□□ -0.22
VIPAS39-209ENST00000556909 TRBV7-1A0A0A6YYK4 115 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 CXorf65A6NEN9 183 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 ANKRD65E5RJM6 399 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 SSX5O60225 188 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 LY6G6CO95867 125 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 HRASP01112 189 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 DEFA4P12838 97 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 HLA-GP17693 338 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 GNG2P59768 71 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 TIMM50Q3ZCQ8 353 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 MARC2Q969Z3 335 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 CXorf58Q96LI9 332 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 ANXA10Q9UJ72 324 aa13.64□□□□□ -0.23
VIPAS39-209ENST00000556909 TRAV25A0A0B4J276 109 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms