RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CD40LGP29965 261 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 RPL5P46777 297 aaKnown RBP8.01□□□□□ -1.13
SNX6-208ENST00000556712 TMBIM6P55061 237 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 DGCR2P98153 550 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 PHLDA2Q53GA4 152 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 DHRS11Q6UWP2 260 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 MMD2Q8IY49 270 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 ADAD2Q8NCV1 583 aaKnown RBP8.01□□□□□ -1.13
SNX6-208ENST00000556712 TMEM167AQ8TBQ9 72 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 DCUN1D4Q92564 292 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 DPF1Q92782 380 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 ISOC1Q96CN7 298 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 RHOVQ96L33 236 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 OR2A7Q96R45 310 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 MCRIP2Q9BUT9 160 aaKnown RBP8.01□□□□□ -1.13
SNX6-208ENST00000556712 CCDC59Q9P031 241 aaKnown RBP8.01□□□□□ -1.13
SNX6-208ENST00000556712 KLK11Q9UBX7 282 aa8.01□□□□□ -1.13
SNX6-208ENST00000556712 TRAV3A0A0B4J244 114 aa8□□□□□ -1.13
SNX6-208ENST00000556712 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
SNX6-208ENST00000556712 TEX22C9J3V5 150 aa8□□□□□ -1.13
SNX6-208ENST00000556712 E7EUB6 86 aa8□□□□□ -1.13
SNX6-208ENST00000556712 LINC01619G3V211 115 aa8□□□□□ -1.13
SNX6-208ENST00000556712 H3BUA1 57 aa8□□□□□ -1.13
SNX6-208ENST00000556712 GPR31O00270 319 aa8□□□□□ -1.13
SNX6-208ENST00000556712 CREBL2O60519 120 aaPredicted RBP8□□□□□ -1.13
SNX6-208ENST00000556712 NOL3O60936 208 aaKnown RBP8□□□□□ -1.13
SNX6-208ENST00000556712 CD3DP04234 171 aa8□□□□□ -1.13
SNX6-208ENST00000556712 RPL27AP46776 148 aaKnown RBP8□□□□□ -1.13
SNX6-208ENST00000556712 TSPAN5P62079 268 aa8□□□□□ -1.13
SNX6-208ENST00000556712 ZNF45Q02386 682 aa8□□□□□ -1.13
SNX6-208ENST00000556712 REC114Q7Z4M0 266 aa8□□□□□ -1.13
SNX6-208ENST00000556712 OR6F1Q8NGZ6 308 aa8□□□□□ -1.13
SNX6-208ENST00000556712 VSTM2AQ8TAG5 236 aa8□□□□□ -1.13
SNX6-208ENST00000556712 DLX4Q92988 240 aaPredicted RBP8□□□□□ -1.13
SNX6-208ENST00000556712 FYTTD1Q96QD9 318 aaKnown RBP8□□□□□ -1.13
SNX6-208ENST00000556712 GPR61Q9BZJ8 451 aa8□□□□□ -1.13
SNX6-208ENST00000556712 TINAGL1Q9GZM7 467 aaPredicted RBP8□□□□□ -1.13
SNX6-208ENST00000556712 C6orf62Q9GZU0 229 aaPredicted RBP8□□□□□ -1.13
SNX6-208ENST00000556712 HRASLSQ9HDD0 168 aa8□□□□□ -1.13
SNX6-208ENST00000556712 TMEM140Q9NV12 185 aa8□□□□□ -1.13
SNX6-208ENST00000556712 C13orf42A0A1B0GVH6 325 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 OVOL1O14753 267 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 RBFOX2O43251 390 aaKnown RBP eCLIP7.99□□□□□ -1.131e-8■■■■■ 29.5
SNX6-208ENST00000556712 PGLYRP1O75594 196 aaPredicted RBP7.99□□□□□ -1.13
SNX6-208ENST00000556712 HPRT1P00492 218 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 HRASP01112 189 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 REG1AP05451 166 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
SNX6-208ENST00000556712 OR9G9P0C7N8 305 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 PPP5CP53041 499 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 TAS2R31P59538 309 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 RPL8P62917 257 aaKnown RBP7.99□□□□□ -1.13
SNX6-208ENST00000556712 VAX1Q5SQQ9 334 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 FAAP20Q6NZ36 180 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 HAPLN4Q86UW8 402 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 OR4D10Q8NGI6 311 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 TMEM68Q96MH6 324 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 BCL7BQ9BQE9 202 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 SLIRPQ9GZT3 109 aaKnown RBP7.99□□□□□ -1.13
SNX6-208ENST00000556712 BET1LQ9NYM9 111 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 MTFP1Q9UDX5 166 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 CEPT1Q9Y6K0 416 aa7.99□□□□□ -1.13
SNX6-208ENST00000556712 CCDC160A6NGH7 325 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 SAP30O75446 220 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 OR2J3O76001 311 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 HSPB1P04792 205 aaKnown RBP7.98□□□□□ -1.13
SNX6-208ENST00000556712 ZNF735P0CB33 412 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 AREGP15514 252 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 NQO2P16083 231 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 HLA-GP17693 338 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 F2RP25116 425 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 LPAR6P43657 344 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 RHOGP84095 191 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 IL18Q14116 193 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 POU2AF1Q16633 256 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 ZNF585BQ52M93 769 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 RNASE10Q5GAN6 216 aaKnown RBP7.98□□□□□ -1.13
SNX6-208ENST00000556712 TBC1D26Q86UD7 250 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 CMTM1Q8IZ96 169 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 DMBX1Q8NFW5 382 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 FCAMRQ8WWV6 532 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 BORCS5Q969J3 196 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 PRR25Q96S07 402 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 SPIN2AQ99865 258 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 SPIN2BQ9BPZ2 258 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 RSRP1Q9BUV0 290 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 AKIP1Q9NQ31 210 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 COMMD9Q9P000 198 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 SCOCQ9UIL1 159 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 TGP01266 2768 aa7.98□□□□□ -1.13
SNX6-208ENST00000556712 A0A0G2JLM5 398 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 MARCH11A6NNE9 402 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 GABARAPH6UMI1 98 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 UPK2O00526 184 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 PGAM2P15259 253 aa7.97□□□□□ -1.13
SNX6-208ENST00000556712 PI3P19957 117 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms