RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 PRSS8Q16651 343 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 RTL8BQ17RB0 113 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 SPANXN2Q5MJ10 180 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 FAM89BQ8N5H3 189 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 CMTM3Q96MX0 182 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 KCNK15Q9H427 330 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 C12orf4Q9NQ89 552 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 SDHAF2Q9NX18 166 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 COMMD3Q9UBI1 195 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 RABL2AQ9UBK7 228 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-223ENST00000556689 HSF4Q9ULV5 492 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 SPATA2Q9UM82 520 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 RABL2BQ9UNT1 228 aa9.5□□□□□ -0.89
SHMT2-223ENST00000556689 KMT2AQ03164 3969 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 GGCTO75223 188 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 CD37P11049 281 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 CBLN1P23435 193 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 TMEM50BP56557 158 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 CLDN12P56749 244 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 UBE2KP61086 200 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 MRPS15P82914 257 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 ARL6IP1Q15041 203 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 VMA21Q3ZAQ7 101 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 CEMP1Q6PRD7 247 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 NECAP1Q8NC96 275 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 C15orf40Q8WUR7 153 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 SRSF12Q8WXF0 261 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 S100A16Q96FQ6 103 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 CMSS1Q9BQ75 279 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 SLIRPQ9GZT3 109 aaKnown RBP9.49□□□□□ -0.89
SHMT2-223ENST00000556689 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 RHBDL2Q9NX52 303 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
SHMT2-223ENST00000556689 A0A0A6YYH2 397 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 A6NJ64 397 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 PPP5D1E7EU14 171 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 LGALS9O00182 355 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 ACTL6BO94805 426 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 OR2C1O95371 312 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 HLA-AP01891 365 aaKnown RBP9.48□□□□□ -0.89
SHMT2-223ENST00000556689 APOA1P02647 267 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 EDN2P20800 178 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 ZNF45Q02386 682 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 ZNF57Q68EA5 555 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-223ENST00000556689 IDO2Q6ZQW0 420 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 LINC00299Q6ZSB3 139 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 NR2C2APQ86WQ0 139 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 OR56B1Q8NGI3 324 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 OR52B4Q8NGK2 314 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 OR4A4PQ8NGN8 299 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 GFI1Q99684 422 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 SPIN2AQ99865 258 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 SPIN2BQ9BPZ2 258 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 ATG5Q9H1Y0 275 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 OR2D2Q9H210 308 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 KLK5Q9Y337 293 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-223ENST00000556689 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
SHMT2-223ENST00000556689 A0A0J9YWU9 116 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 TMEM272A0A1B0GTI8 110 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 OR2J3O76001 311 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 NDUFB8O95169 186 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 CD3GP09693 182 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 C15orf32Q32M92 178 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 C2orf76Q3KRA6 126 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 TMEM69Q5SWH9 247 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 SLC25A42Q86VD7 318 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 OR10J5Q8NHC4 309 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 S100ZQ8WXG8 99 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 ARHGAP5-AS1Q96IT6 56 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 TSC22D3Q99576 134 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 PECRQ9BY49 303 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 RBM7Q9Y580 266 aaKnown RBP9.47□□□□□ -0.89
SHMT2-223ENST00000556689 SELENOKQ9Y6D0 94 aa9.47□□□□□ -0.89
SHMT2-223ENST00000556689 ZNF320A2RRD8 509 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 FOXI3A8MTJ6 420 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 BET1O15155 118 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 FABP7O15540 132 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 HPGDSO60760 199 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 CRYZL1O95825 349 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 EWSR1Q01844 656 aaKnown RBP eCLIP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 TNFRSF9Q07011 255 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 IGSF11Q5DX21 431 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 TMEM61Q8N0U2 210 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 RPP25LQ8N5L8 163 aaKnown RBP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 ADTRPQ96IZ2 230 aa9.46□□□□□ -0.9
SHMT2-223ENST00000556689 NXF2Q9GZY0 626 aaKnown RBP9.46□□□□□ -0.9
SHMT2-223ENST00000556689 ZNF430Q9H8G1 570 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms