RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 MIXL1Q9H2W2 232 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 SLA2Q9H6Q3 261 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 COA4Q9NYJ1 87 aa6.23□□□□□ -1.41
VTI1B-206ENST00000556461 C13orf42A0A1B0GVH6 325 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 FAM25AB3EWG3 89 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 FAM25CB3EWG5 89 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 FAM25GB3EWG6 89 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 H3BUA1 57 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 MPPED1O15442 326 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 PGLYRP1O75594 196 aaPredicted RBP6.22□□□□□ -1.41
VTI1B-206ENST00000556461 S1PR2O95136 353 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 BRI3O95415 125 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 AREGP15514 252 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 ZNF182P17025 639 aaPredicted RBP6.22□□□□□ -1.41
VTI1B-206ENST00000556461 CD40LGP29965 261 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 KIR2DS2P43631 304 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 TAS2R46P59540 309 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 AADACL3Q5VUY0 350 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 OR4A47Q6IF82 309 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 CLVS1Q8IUQ0 354 aaPredicted RBP6.22□□□□□ -1.41
VTI1B-206ENST00000556461 ZBTB34Q8NCN2 500 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 TMEM68Q96MH6 324 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 FYTTD1Q96QD9 318 aaKnown RBP6.22□□□□□ -1.41
VTI1B-206ENST00000556461 ABHD1Q96SE0 405 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 AKIP1Q9NQ31 210 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 EXTL2Q9UBQ6 330 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 STAB2Q8WWQ8 2551 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
VTI1B-206ENST00000556461 DNAH7Q8WXX0 4024 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SORL1Q92673 2214 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 TRBV9A0A0B4J1U6 114 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SMIM31A0A1B0GVY4 71 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 M0QYG6 137 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 UPK2O00526 184 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 CTDSP2O14595 271 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 RBFOX2O43251 390 aaKnown RBP eCLIP6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SAP30O75446 220 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 ACTL6BO94805 426 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 HRASP01112 189 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 RLN1P04808 185 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 REG1AP05451 166 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 ZNF735P0CB33 412 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 RPL27AP46776 148 aaKnown RBP6.21□□□□□ -1.42
VTI1B-206ENST00000556461 RHOGP84095 191 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 POU2AF1Q16633 256 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 ZNF585BQ52M93 769 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 PHLDA2Q53GA4 152 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 C11orf87Q6NUJ2 197 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 ZNF343Q6P1L6 599 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 ACSM6Q6P461 480 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 MZT2AQ6P582 158 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 TTC9CQ8N5M4 171 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 OR52I2Q8NH67 350 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SPIN2AQ99865 258 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SPIN2BQ9BPZ2 258 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 SCPEP1Q9HB40 452 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 RANGRFQ9HD47 186 aaPredicted RBP6.21□□□□□ -1.42
VTI1B-206ENST00000556461 BET1LQ9NYM9 111 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 PEF1Q9UBV8 284 aaKnown RBP6.21□□□□□ -1.42
VTI1B-206ENST00000556461 KLK11Q9UBX7 282 aa6.21□□□□□ -1.42
VTI1B-206ENST00000556461 LSM4Q9Y4Z0 139 aaKnown RBP6.21□□□□□ -1.42
VTI1B-206ENST00000556461 A0A0G2JLM5 398 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 BMPR1BO00238 502 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 CREBL2O60519 120 aaPredicted RBP6.2□□□□□ -1.42
VTI1B-206ENST00000556461 OR2J3O76001 311 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 NDUFB8O95169 186 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 HPRT1P00492 218 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 IGHV3-23P01764 117 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 NQO2P16083 231 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 SPNP16150 400 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 HLA-GP17693 338 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 RCVRNP35243 200 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 LPAR6P43657 344 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 SYNJ2BPP57105 145 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 TAS2R31P59538 309 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 OR2B8PP59922 312 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 RPL8P62917 257 aaKnown RBP6.2□□□□□ -1.42
VTI1B-206ENST00000556461 CATR1Q13166 79 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 KLF5Q13887 457 aaPredicted RBP6.2□□□□□ -1.42
VTI1B-206ENST00000556461 IL34Q6ZMJ4 242 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 ZNF429Q86V71 674 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 LAX1Q8IWV1 398 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 OR4D10Q8NGI6 311 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 OR6F1Q8NGZ6 308 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 VSTM2AQ8TAG5 236 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 DYNC2LI1Q8TCX1 351 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 FCAMRQ8WWV6 532 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 AP3S1Q92572 193 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 USMG5Q96IX5 58 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 FANCD2OSQ96PS1 177 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 HRASLSQ9HDD0 168 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 SLC2A9Q9NRM0 540 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 TMEM140Q9NV12 185 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 ZNF256Q9Y2P7 627 aaPredicted RBP6.2□□□□□ -1.42
VTI1B-206ENST00000556461 DMRT1Q9Y5R6 373 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 S4R3C0 116 aa6.2□□□□□ -1.42
VTI1B-206ENST00000556461 IGLC7A0M8Q6 106 aa6.19□□□□□ -1.42
VTI1B-206ENST00000556461 DBX1A6NMT0 343 aa6.19□□□□□ -1.42
VTI1B-206ENST00000556461 NPIPB5A8MRT5 1133 aa6.19□□□□□ -1.42
VTI1B-206ENST00000556461 PPP5D1E7EU14 171 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms