RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RSU1Q15404 277 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 ANKRD55Q3KP44 614 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 NHLRC3Q5JS37 347 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 CTRB2Q6GPI1 263 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 RPL22L1Q6P5R6 122 aaKnown RBP5.04□□□□□ -1.6
ATXN3-236ENST00000556220 FAM131AQ6UXB0 335 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 ASCL4Q6XD76 172 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 KCTD20Q7Z5Y7 419 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 KIR2DL5AQ8N109 375 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 PRR18Q8N4B5 295 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 OR52B4Q8NGK2 314 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 OR10K1Q8NGX5 313 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 KIR2DL5BQ8NHK3 375 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 GRPEL2Q8TAA5 225 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 UFD1Q92890 307 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 SLC25A46Q96AG3 418 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 MRPS24Q96EL2 167 aaKnown RBP5.04□□□□□ -1.6
ATXN3-236ENST00000556220 TMEM68Q96MH6 324 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 BCL7BQ9BQE9 202 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 PRRG3Q9BZD7 231 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 OR2S2Q9NQN1 319 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 TAS2R4Q9NYW5 299 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 CCDC59Q9P031 241 aaKnown RBP5.04□□□□□ -1.6
ATXN3-236ENST00000556220 METTL1Q9UBP6 276 aaKnown RBP5.04□□□□□ -1.6
ATXN3-236ENST00000556220 TRAPPC2LQ9UL33 140 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 ING4Q9UNL4 249 aa5.04□□□□□ -1.6
ATXN3-236ENST00000556220 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 A0A075B6Q4 140 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 SAA2-SAA4A0A096LPE2 208 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 A0A0A6YYD4 124 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 IRGMA1A4Y4 181 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 CCDC160A6NGH7 325 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 OR5H14A6NHG9 310 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 H0YJW9 148 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 GEMIN2O14893 280 aaKnown RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 SULT1B1O43704 296 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 YPEL1O60688 119 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 TUSC2O75896 110 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 SAA2P0DJI9 122 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 EDN2P20800 178 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 TNFSF8P32971 234 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 MC5RP33032 325 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 ETV6P41212 452 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 CCR9P51686 369 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 LY6G6FQ5SQ64 297 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 ATAD3CQ5T2N8 411 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 C6orf183Q5T699 404 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 ZNF57Q68EA5 555 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 FAM71F2Q6NXP2 309 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 TRAT1Q6PIZ9 186 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 CEACAM19Q7Z692 300 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 LINC00596Q86U02 117 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 SERPINA12Q8IW75 414 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 TMEM61Q8N0U2 210 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 ZNF645Q8N7E2 425 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 OR5D14Q8NGL3 314 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 OR13C3Q8NGS6 347 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 OR4K15Q8NH41 348 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 TNFAIP8L1Q8WVP5 186 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 YPEL2Q96QA6 119 aa5.03□□□□□ -1.6
ATXN3-236ENST00000556220 ELF5Q9UKW6 265 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 AK6Q9Y3D8 172 aaKnown RBP5.03□□□□□ -1.6
ATXN3-236ENST00000556220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 A0A1W2PP11 408 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 M0R2N4 97 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 HPGDSO60760 199 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 ELK1P19419 428 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 CBLN1P23435 193 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 CALRP27797 417 aaKnown RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 PPP1CCP36873 323 aaKnown RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 LGALS7P47929 136 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 MFAP2P55001 183 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 RBM11P57052 281 aaKnown RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 RPS16P62249 146 aaKnown RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 SSBP2P81877 361 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 HTD2P86397 168 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 GNMTQ14749 295 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 BAK1Q16611 211 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 MPV17LQ2QL34 196 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 LGALS9BQ3B8N2 356 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 CCDC58Q4VC31 144 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 GLDNQ6ZMI3 551 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 FAM220AQ7Z4H9 259 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 GAPTQ8N292 157 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 NEK7Q8TDX7 302 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 THRSPQ92748 146 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 CPNE2Q96FN4 548 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-236ENST00000556220 GPER1Q99527 375 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 METTL9Q9H1A3 318 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 TAF9BQ9HBM6 251 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 SCRT2Q9NQ03 307 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 IL36GQ9NZH8 169 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 PIPOXQ9P0Z9 390 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 JPT1Q9UK76 154 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 TBC1D24Q9ULP9 559 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 WASHC3Q9Y3C0 194 aa5.02□□□□□ -1.61
ATXN3-236ENST00000556220 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms