RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 BTNL8Q6UX41 500 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 IL34Q6ZMJ4 242 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 LYPD6BQ8NI32 183 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 OR4C12Q96R67 309 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 IGHV2-26A0A0B4J1V2 119 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 TRAV3A0A0B4J244 114 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 UMAD1C9J7I0 102 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 KRBOX1C9JBD0 128 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 IGLV1-47P01700 117 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 IGKV1-16P04430 117 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 OR8U8P0C7N1 319 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 RPP30P78346 268 aaKnown RBP11.96□□□□□ -0.49
VPS33B-205ENST00000556096 PDPNQ86YL7 162 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 BEND2Q8NDZ0 799 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 OR2G3Q8NGZ4 309 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
VPS33B-205ENST00000556096 TACC2O95359 2948 aa11.96□□□□□ -0.5
VPS33B-205ENST00000556096 C22orf46C9J442 243 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 ARG1P05089 322 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 MC5RP33032 325 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 VDAC2P45880 294 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-205ENST00000556096 F2RL1P55085 397 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 HSPE1P61604 102 aaKnown RBP11.95□□□□□ -0.5
VPS33B-205ENST00000556096 SLC38A11Q08AI6 406 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 Q6ZRG5 221 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 TGIF2LXQ8IUE1 241 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 PUSL1Q8N0Z8 303 aaKnown RBP11.95□□□□□ -0.5
VPS33B-205ENST00000556096 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 LHX4Q969G2 390 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 CLCC1Q96S66 551 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 SSBP3Q9BWW4 388 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-205ENST00000556096 BET1LQ9NYM9 111 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 TCF19Q9Y242 345 aa11.95□□□□□ -0.5
VPS33B-205ENST00000556096 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 LOC105371242A0A075B767 164 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 SRRM4A7MD48 611 aaKnown RBP11.94□□□□□ -0.5
VPS33B-205ENST00000556096 M0R1W7 72 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 UPK2O00526 184 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 NDUFS7O75251 213 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 ZP3P21754 424 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 PJVKQ0ZLH3 352 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 LRRC75BQ2VPJ9 315 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 HLA-DRB5Q30154 266 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 OR10P1Q8NGE3 313 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 SCGB1C1Q8TD33 95 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 PINX1Q96BK5 328 aaKnown RBP11.94□□□□□ -0.5
VPS33B-205ENST00000556096 FLYWCH2Q96CP2 140 aaKnown RBP11.94□□□□□ -0.5
VPS33B-205ENST00000556096 HIPK2Q9H2X6 1198 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 HRH4Q9H3N8 390 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 ZNF257Q9Y2Q1 563 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 ABCA12Q86UK0 2595 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 H7C2Y5 167 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 SHOXO15266 292 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 REG1BP48304 166 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 RAB13P51153 203 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 SPINK9Q5DT21 86 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 SLC25A24Q6NUK1 477 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 TMEM182Q6ZP80 229 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-205ENST00000556096 OR4C13Q8NGP0 309 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 IGFBPL1Q8WX77 278 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 FKBP11Q9NYL4 201 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 UNC79Q9P2D8 2635 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 WASHC3Q9Y3C0 194 aa11.94□□□□□ -0.5
VPS33B-205ENST00000556096 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 PRH1P02810 166 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 CAMLGP49069 296 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 THNSL2Q86YJ6 484 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 PSMG3Q9BT73 122 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-205ENST00000556096 TMEM147Q9BVK8 224 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 WDR61Q9GZS3 305 aaKnown RBP11.93□□□□□ -0.5
VPS33B-205ENST00000556096 HEYLQ9NQ87 328 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-205ENST00000556096 ONECUT1Q9UBC0 465 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 AMMECR1Q9Y4X0 333 aaPredicted RBP11.93□□□□□ -0.5
VPS33B-205ENST00000556096 CSMD2Q7Z408 3487 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
VPS33B-205ENST00000556096 AKAP6Q13023 2319 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 BUB1B-PAK6H3BSN5 160 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 KBTBD11O94819 623 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
VPS33B-205ENST00000556096 RUNX1Q01196 453 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 VWC2Q2TAL6 325 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 C1orf122Q6ZSJ8 110 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 Q8N7P7 452 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 OR4A5Q8NH83 315 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 LINC00052Q96N35 136 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 OR51B2Q9Y5P1 312 aa11.92□□□□□ -0.5
VPS33B-205ENST00000556096 KIR3DL3Q8N743 410 aa11.91□□□□□ -0.5
VPS33B-205ENST00000556096 VSTM2AQ8TAG5 236 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms