RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 OR4X2Q8NGF9 303 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 OR13C8Q8NGS7 320 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 OR2T4Q8NH00 348 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 TTTY13Q9BZ97 58 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 XAGE1AQ9HD64 81 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 XPNPEP1Q9NQW7 623 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 AK3Q9UIJ7 227 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 COQ4Q9Y3A0 265 aa1.09□□□□□ -2.23
SCFD1-217ENST00000555953 ZFHX2Q9C0A1 2572 aaPredicted RBP1.09□□□□□ -2.24
SCFD1-217ENST00000555953 COL4A1P02462 1669 aa1.09□□□□□ -2.24
SCFD1-217ENST00000555953 PTPRBP23467 1997 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 CPAMD8Q8IZJ3 1885 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 TRAV41A0A0B4J266 112 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 J3QQQ9 107 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 LST1O00453 97 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 TGOLN2O43493 480 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 PSMB8P28062 276 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 CCR7P32248 378 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 MARCKSL1P49006 195 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 IDH3GP51553 393 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-217ENST00000555953 FXYD7P58549 80 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 RAB5BP61020 215 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 RPL26P61254 145 aaKnown RBP1.08□□□□□ -2.24
SCFD1-217ENST00000555953 AKR1C1Q04828 323 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 NUMA1Q14980 2115 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 C1orf194Q5T5A4 169 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 PTRHD1Q6GMV3 140 aaKnown RBP1.08□□□□□ -2.24
SCFD1-217ENST00000555953 LYZL1Q6UWQ5 148 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 HIST2H3AQ71DI3 136 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 DEFB125Q8N687 156 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 PTH2Q96A98 100 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 DIRAS2Q96HU8 199 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 TIMM21Q9BVV7 248 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 SPZ1Q9BXG8 430 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 GPR84Q9NQS5 396 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 RPL26L1Q9UNX3 145 aaKnown RBP1.08□□□□□ -2.24
SCFD1-217ENST00000555953 PRELID1Q9Y255 219 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 PXMP4Q9Y6I8 212 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 EVC2Q86UK5 1308 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 FLT4P35916 1363 aa1.08□□□□□ -2.24
SCFD1-217ENST00000555953 KIAA2026Q5HYC2 2103 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 DCCP43146 1447 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 GREB1Q4ZG55 1949 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 CR1P17927 2039 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 IGHV3-64A0A075B6Q5 118 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 TMSB15BA0A087X1C1 80 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 A0A0J9YW62 118 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 SIGLEC16A6NMB1 481 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 KCNK1O00180 336 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 KLRC4O43908 158 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 E2F6O75461 281 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 DCTN3O75935 186 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 CALB1P05937 261 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 PEBP1P30086 187 aaKnown RBP1.07□□□□□ -2.24
SCFD1-217ENST00000555953 MAP2K4P45985 399 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 RAP1GDS1P52306 607 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 NKX2-5P52952 324 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-217ENST00000555953 TPI1P60174 286 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 TMEM258P61165 79 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 TNFAIP6P98066 277 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-217ENST00000555953 CAV1Q03135 178 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 TMEM42Q69YG0 159 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 C8orf74Q6P047 294 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 GID4Q8IVV7 300 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 OR51D1Q8NGF3 324 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 OR51T1Q8NGJ9 327 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 SGMS2Q8NHU3 365 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 SPACA4Q8TDM5 124 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 ASB17Q8WXJ9 295 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 MRPS26Q9BYN8 205 aaKnown RBP1.07□□□□□ -2.24
SCFD1-217ENST00000555953 OR51I1Q9H343 314 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 CXorf21Q9HAI6 301 aa1.07□□□□□ -2.24
SCFD1-217ENST00000555953 FN1P02751 2386 aaKnown RBP1.07□□□□□ -2.24
SCFD1-217ENST00000555953 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.06□□□□□ -2.24
SCFD1-217ENST00000555953 A0A1B0GV50 99 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 RFPL4AA6NLU0 287 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 RFPL4AL1F8VTS6 287 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 PLA2G10O15496 165 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 IFNA5P01569 189 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 RPS17P08708 135 aaKnown RBP1.06□□□□□ -2.24
SCFD1-217ENST00000555953 ALDH3A1P30838 453 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 HAAOP46952 286 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 TCL1AP56279 114 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 CTAG1AP78358 180 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 GLO1Q04760 184 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 FABP9Q0Z7S8 132 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 TNFAIP8L3Q5GJ75 292 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 SFXN4Q6P4A7 337 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 SSX8Q7RTT4 187 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 S100A7AQ86SG5 101 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 C1orf158Q8N1D5 194 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 DYNAPQ8N1N2 210 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 OR1L8Q8NGR8 309 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 KLK6Q92876 244 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 ROPN1LQ96C74 230 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 C8orf76Q96K31 380 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 UCK1Q9HA47 277 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 GUCA1BQ9UMX6 200 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 RBM7Q9Y580 266 aaKnown RBP1.06□□□□□ -2.24
SCFD1-217ENST00000555953 SMARCA4P51532 1647 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms