RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 J3QR89 54 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 ACAA1P09110 424 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-220ENST00000555612 RAB9AP51151 201 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 MFAP2P55001 183 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 ELOBQ15370 118 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 FAM159AQ6UWV7 190 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 LRP11Q86VZ4 500 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 MRPL20Q9BYC9 149 aaKnown RBP6.95□□□□□ -1.3
SYNE2-220ENST00000555612 AICDAQ9GZX7 198 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 OR5AC2Q9NZP5 309 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-220ENST00000555612 TM4SF5O14894 197 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
SYNE2-220ENST00000555612 CFDP00746 253 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-220ENST00000555612 ZNF146Q15072 292 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 COX19Q49B96 90 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 PEMTQ9UBM1 199 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 GPR132Q9UNW8 380 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 TET1Q8NFU7 2136 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 KBTBD11-OT1A0A1B0GTJ5 212 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 OR51M1Q9H341 326 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 SIPA1L1O43166 1804 aa6.95□□□□□ -1.3
SYNE2-220ENST00000555612 PROB1E7EW31 1015 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 NDUFB4O95168 129 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 DLX6P56179 175 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 IQCJQ1A5X6 159 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 ABLIM2Q6H8Q1 611 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 OR51G1Q8NGK1 321 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 ISOC2Q96AB3 205 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 TNFSF18Q9UNG2 199 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 MSRB2Q9Y3D2 182 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 PIN1P1O15428 100 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 HSPB1P04792 205 aaKnown RBP6.94□□□□□ -1.3
SYNE2-220ENST00000555612 ALX4Q9H161 411 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-220ENST00000555612 FUT9Q9Y231 359 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 A8MWL6 223 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 SEC11BP0C7V7 166 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 P2RY4P51582 365 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 SERF2P84101 59 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 C2orf83Q53S99 150 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 CLRN3Q8NCR9 226 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 REPIN1Q9BWE0 567 aaKnown RBP6.94□□□□□ -1.3
SYNE2-220ENST00000555612 IGHV1-18A0A0C4DH31 117 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 IQCF6A8MYZ5 107 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 CA2P00918 260 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 MEF2CQ06413 473 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-220ENST00000555612 FAM74A3Q4VXF1 159 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 ASPHD2Q6ICH7 369 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 WFIKKN1Q96NZ8 548 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 GPR82Q96P67 336 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 DUX3Q96PT4 197 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 OR4C46A6NHA9 309 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 H3BQ15 152 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 CEACAM4O75871 244 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 TFF1P04155 84 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 C8orf88P0DMB2 117 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 MMP9P14780 707 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 CKS2P33552 79 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 GALNT14Q96FL9 552 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 C1QTNF5Q9BXJ0 243 aa6.94□□□□□ -1.3
SYNE2-220ENST00000555612 PRSS8Q16651 343 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 PQLC2Q6ZP29 291 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 TBX15Q96SF7 602 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 C21orf62Q9NYP8 219 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 LINC00312Q9Y6C7 94 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 PLXNA1Q9UIW2 1896 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 IBA57Q5T440 356 aaKnown RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 C1QL2Q7Z5L3 287 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 DSCR9P59020 149 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 TMEM177Q53S58 311 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 DEFB121Q5J5C9 76 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 GOLT1AQ6ZVE7 132 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 OSR1Q8TAX0 266 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 SLC25A38Q96DW6 304 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 NINQ8N4C6 2090 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 MYOFQ9NZM1 2061 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 CNOT1A5YKK6 2376 aaKnown RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 NPIPB9F8W1W9 429 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 BCL2P10415 239 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 CD99P14209 185 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 DPPA3Q6W0C5 159 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 PGLYRP4Q96LB8 373 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 GCSHP23434 173 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 TMEM183BQ1AE95 376 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 H1FOOQ8IZA3 346 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 SRSF12Q8WXF0 261 aaKnown RBP6.93□□□□□ -1.3
SYNE2-220ENST00000555612 DMRTA2Q96SC8 542 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 LINC01587Q99440 93 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 PSMB11A5LHX3 300 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 FAM90A26D6RGX4 464 aa6.93□□□□□ -1.3
SYNE2-220ENST00000555612 FAM166AQ6J272 317 aa6.92□□□□□ -1.3
SYNE2-220ENST00000555612 NABP2Q9BQ15 211 aa6.92□□□□□ -1.3
SYNE2-220ENST00000555612 TUBD1Q9UJT1 453 aa6.92□□□□□ -1.3
SYNE2-220ENST00000555612 NEUROG3Q9Y4Z2 214 aa6.92□□□□□ -1.3
SYNE2-220ENST00000555612 BRCA1P38398 1863 aaKnown RBP6.92□□□□□ -1.3
SYNE2-220ENST00000555612 NPFFO15130 113 aa6.92□□□□□ -1.3
SYNE2-220ENST00000555612 ARL14EPLP0DKL9 152 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms