RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RAB8AP61006 207 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 ZNF846Q147U1 533 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 TMEM249Q2WGJ8 235 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 LCA10Q71F78 164 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 AAED1Q7RTV5 226 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 GPHB5Q86YW7 130 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 WFDC11Q8NEX6 87 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 MITD1Q8WV92 249 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 BORCS5Q969J3 196 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 TMEM70Q9BUB7 260 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 PARVAQ9NVD7 372 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 CFAP45Q9UL16 551 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 TTC21AQ8NDW8 1320 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 MED12Q93074 2177 aa-0.16□□□□□ -2.44
SNX6-204ENST00000555541 ABCC12Q96J65 1359 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 SIPA1L1O43166 1804 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 H0YC42 278 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 TNFAIP8O95379 198 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 LINC00614P0C842 121 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 GRPRP30550 384 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 DLX6P56179 175 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 H2BFSP57053 126 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 SNAP25P60880 206 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 TNNC1P63316 161 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 HPCAP84074 193 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 SMAGPQ0VAQ4 97 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 KCNJ8Q15842 424 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 OOSP2Q86WS3 158 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 HEATR5AQ86XA9 2040 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 TBC1D19Q8N5T2 526 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 OR11H6Q8NGC7 330 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 ZNF418Q8TF45 676 aaPredicted RBP-0.17□□□□□ -2.44
SNX6-204ENST00000555541 TMEM239Q8WW34 195 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 CIDECQ96AQ7 238 aaPredicted RBP-0.17□□□□□ -2.44
SNX6-204ENST00000555541 ACER3Q9NUN7 267 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 ENPP5Q9UJA9 477 aa-0.17□□□□□ -2.44
SNX6-204ENST00000555541 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.17□□□□□ -2.44
SNX6-204ENST00000555541 TMED7-TICAM2A0A0A6YYA0 188 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 DAPL1A0PJW8 107 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 SGCEO43556 437 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 FADS1O60427 444 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 OR5F1O95221 314 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 CSTAP01040 98 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 SULT1A3P0DMM9 295 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 SULT1A4P0DMN0 295 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 CCL5P13501 91 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 HIST1H1CP16403 213 aaKnown RBP-0.18□□□□□ -2.44
SNX6-204ENST00000555541 HLA-DMBP28068 263 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 CSN1S1P47710 185 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 EFNA4P52798 201 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 FXYD2P54710 66 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 FKBP1AP62942 108 aaKnown RBP-0.18□□□□□ -2.44
SNX6-204ENST00000555541 DMTNQ08495 405 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 SPINK9Q5DT21 86 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 SAPCD1Q5SSQ6 148 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 GKN2Q86XP6 184 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 LRRC20Q8TCA0 184 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 MROQ9BYG7 248 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 METTL9Q9H1A3 318 aa-0.18□□□□□ -2.44
SNX6-204ENST00000555541 A0A1B0GW54 56 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 OR2T8A6NH00 312 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 METTL15A6NJ78 407 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 I3L521 148 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 LEPROTO15243 131 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 NSA2O95478 260 aaKnown RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 ATP5G1P05496 136 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 ASAH2BP0C7U1 165 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 ZNF25P17030 456 aaPredicted RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 NFYAP23511 347 aaPredicted RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 KDELR1P24390 212 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 RAB13P51153 203 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 FABP5Q01469 135 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 C18orf21Q32NC0 220 aaPredicted RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 SSX8Q7RTT4 187 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 TMEM251Q8N6I4 163 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 SPERTQ8NA61 448 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 ATP6V1C2Q8NEY4 427 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 ANKRD7Q92527 254 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 OR8D2Q9GZM6 311 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 XAGE1AQ9HD64 81 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 MRM2Q9UI43 246 aaKnown RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 PRELID1Q9Y255 219 aa-0.19□□□□□ -2.44
SNX6-204ENST00000555541 SNRNP200O75643 2136 aaKnown RBP-0.19□□□□□ -2.44
SNX6-204ENST00000555541 DMBT1Q9UGM3 2413 aaPredicted RBP-0.2□□□□□ -2.44
SNX6-204ENST00000555541 TRBV6-8A0A0A6YYG3 113 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 A0A0D9SG42 100 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 C5orf49A4QMS7 147 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 GGT3PA6NGU5 568 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 COX7A2LO14548 114 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 OTCP00480 354 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CST4P01036 141 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CXCL2P19875 107 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CXCL3P19876 107 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CD40LGP29965 261 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 S100A7P31151 101 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 OR4D2P58180 307 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 RAB4BP61018 213 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 SUPT4H1P63272 117 aaKnown RBP-0.2□□□□□ -2.44
SNX6-204ENST00000555541 HLA-DRB3P79483 266 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 XIAPP98170 497 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms