RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 DCUN1D4Q92564 292 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 ISOC1Q96CN7 298 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 OR2A7Q96R45 310 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 SCOCQ9UIL1 159 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 RBFOX2O43251 390 aaKnown RBP eCLIP10.54□□□□□ -0.721e-8■■■■■ 29.5
SNX6-203ENST00000555416 RLN1P04808 185 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 RPA2P15927 270 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 KIR2DS2P43631 304 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 DGCR2P98153 550 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 ZNF45Q02386 682 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 AADACL3Q5VUY0 350 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 OR4A47Q6IF82 309 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 MMD2Q8IY49 270 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 OR4D10Q8NGI6 311 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
SNX6-203ENST00000555416 PHB2Q99623 299 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 TINAGL1Q9GZM7 467 aaPredicted RBP10.54□□□□□ -0.72
SNX6-203ENST00000555416 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
SNX6-203ENST00000555416 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
SNX6-203ENST00000555416 SEC14L6B5MCN3 397 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 RGS5O15539 181 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 CD3DP04234 171 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 ZNF585BQ52M93 769 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 PHLDA2Q53GA4 152 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 MRAPQ8TCY5 172 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
SNX6-203ENST00000555416 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
SNX6-203ENST00000555416 SLA2Q9H6Q3 261 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 COA4Q9NYJ1 87 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 MTFP1Q9UDX5 166 aa10.53□□□□□ -0.72
SNX6-203ENST00000555416 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 LINC01619G3V211 115 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 H3BUA1 57 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 ACTL6BO94805 426 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 HRASP01112 189 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 AREGP15514 252 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 TSPAN5P62079 268 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 CATR1Q13166 79 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 POU2AF1Q16633 256 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 VAX1Q5SQQ9 334 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 REC114Q7Z4M0 266 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 FCAMRQ8WWV6 532 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 DPF1Q92782 380 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 RSRP1Q9BUV0 290 aa10.52□□□□□ -0.73
SNX6-203ENST00000555416 GPR31O00270 319 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 MPPED1O15442 326 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 BRI3O95415 125 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 HPRT1P00492 218 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
SNX6-203ENST00000555416 ZNF735P0CB33 412 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 CD40LGP29965 261 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 LPAR6P43657 344 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 RPL27AP46776 148 aaKnown RBP10.51□□□□□ -0.73
SNX6-203ENST00000555416 TAS2R31P59538 309 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 RPL8P62917 257 aaKnown RBP10.51□□□□□ -0.73
SNX6-203ENST00000555416 TTC9CQ8N5M4 171 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 VSTM2AQ8TAG5 236 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 DGCR14Q96DF8 476 aaKnown RBP10.51□□□□□ -0.73
SNX6-203ENST00000555416 FYTTD1Q96QD9 318 aaKnown RBP10.51□□□□□ -0.73
SNX6-203ENST00000555416 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 PLEKHA2Q9HB19 425 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 HRASLSQ9HDD0 168 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 AKIP1Q9NQ31 210 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 TMEM140Q9NV12 185 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 BET1LQ9NYM9 111 aa10.51□□□□□ -0.73
SNX6-203ENST00000555416 TRBV9A0A0B4J1U6 114 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 C13orf42A0A1B0GVH6 325 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 UPK2O00526 184 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 OVOL1O14753 267 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 CREBL2O60519 120 aaPredicted RBP10.5□□□□□ -0.73
SNX6-203ENST00000555416 TPPPO94811 219 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 REG1AP05451 166 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 NQO2P16083 231 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 HLA-GP17693 338 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 PI3P19957 117 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 F2RP25116 425 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 OR2B8PP59922 312 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 RHOGP84095 191 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 C9orf66Q5T8R8 295 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 FAAP20Q6NZ36 180 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 ZNF343Q6P1L6 599 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 LHFPL1Q86WI0 220 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 DIRAS2Q96HU8 199 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 C6orf62Q9GZU0 229 aaPredicted RBP10.5□□□□□ -0.73
SNX6-203ENST00000555416 RBM38Q9H0Z9 239 aaKnown RBP10.5□□□□□ -0.73
SNX6-203ENST00000555416 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
SNX6-203ENST00000555416 GABARAPH6UMI1 98 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 IGKV1-39P01597 117 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 CD74P04233 296 aa10.49□□□□□ -0.73
SNX6-203ENST00000555416 IGKV1D-39P04432 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms