RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 A0A0D9SEW6 157 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 MKRN2OSH3BPM6 223 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 GPR171O14626 319 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 LIN7AO14910 233 aaPredicted RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 RAB36O95755 333 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 TNFP01375 233 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 ACTR1BP42025 376 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 PSMD8P48556 350 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 SKP2Q13309 424 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 LCE1CQ5T751 118 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 Q6ZS52 159 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 TCF24Q7RTU0 167 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 MTERF4Q7Z6M4 381 aaKnown RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 GKN2Q86XP6 184 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 LYPD6Q86Y78 171 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 CRLF3Q8IUI8 442 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 HS3ST5Q8IZT8 346 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 ATP6V1C2Q8NEY4 427 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 OR4P4Q8NGL7 312 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 OR5AK3PQ8NH89 298 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 DYNC2LI1Q8TCX1 351 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 RNASEH2CQ8TDP1 164 aaKnown RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 HIST1H2BAQ96A08 127 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 ALX4Q9H161 411 aaPredicted RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 FBXL3Q9UKT7 428 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 ANK1P16157 1881 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 NUP205Q92621 2012 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 DOCK6Q96HP0 2047 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 IGLV10-54A0A075B6I4 117 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 IGKV1D-37A0A075B6S9 117 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 hCG_1818297A0A087WSY0 165 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 SPTY2D1-AS1A0A0U1RR47 76 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 C9J4A7 227 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 E7EQL1 145 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 PGRMC1O00264 195 aaKnown RBP2.55□□□□□ -2
CKS1BP1-201ENST00000555221 EEF1E1O43324 174 aaKnown RBP2.55□□□□□ -2
CKS1BP1-201ENST00000555221 LTAP01374 205 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 HLA-EP13747 358 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 FAM3AP98173 230 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 CAV1Q03135 178 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 C10orf91Q5T1B1 145 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 CLEC6AQ6EIG7 209 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 SMARCD3Q6STE5 483 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 DNAAF3Q8N9W5 541 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 IMP4Q96G21 291 aaKnown RBP2.55□□□□□ -2
CKS1BP1-201ENST00000555221 DCUN1D1Q96GG9 259 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 TMEM56Q96MV1 263 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 FAM210AQ96ND0 272 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 LYSMD1Q96S90 227 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 PHLDA3Q9Y5J5 127 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 GMEB1Q9Y692 573 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 ITPR1Q14643 2758 aa2.55□□□□□ -2
CKS1BP1-201ENST00000555221 OTOGLQ3ZCN5 2332 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 ZNF407Q9C0G0 2248 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 PLXNA3P51805 1871 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 DMXL1Q9Y485 3027 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 FBN2P35556 2912 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 C1orf232A0A0U1RR37 186 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 LINC00854A0A1B0GVQ3 168 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 LOC285095A0A1B0GVY8 99 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 TRPC5OSA6NMA1 111 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SYNGR1O43759 233 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 CDK14O94921 469 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 KRTAP5-9P26371 169 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SPINT3P49223 89 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 GZMMP51124 257 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 STC1P52823 247 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 DLX6P56179 175 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 GNG11P61952 73 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 DYNLT1P63172 113 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 TNFRSF9Q07011 255 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SLAMF1Q13291 335 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 EIF3IQ13347 325 aaKnown RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 PMS2P3Q13401 168 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 TAF1AQ15573 450 aaPredicted RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 NCBP2-AS2Q69YL0 99 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 TTC33Q6PID6 262 aaPredicted RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 TCF23Q7RTU1 214 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 LRP11Q86VZ4 500 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SPATA24Q86W54 205 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SLC13A5Q86YT5 568 aaPredicted RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 OR11G2Q8NGC1 345 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 OR11L1Q8NGX0 322 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 WFDC5Q8TCV5 224 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 MAGOHBQ96A72 148 aaKnown RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 RAD51AP1Q96B01 352 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 GALMQ96C23 342 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SPACA1Q9HBV2 294 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 C1orf109Q9NX04 203 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 SLC23A2Q9UGH3 650 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 UTP11Q9Y3A2 253 aaKnown RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 NUP210Q8TEM1 1887 aaPredicted RBP2.54□□□□□ -2
CKS1BP1-201ENST00000555221 CEP295Q9C0D2 2601 aa2.54□□□□□ -2
CKS1BP1-201ENST00000555221 PCNX2A6NKB5 2137 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 TENM4Q6N022 2769 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 PTPRDP23468 1912 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 GREB1Q4ZG55 1949 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms