RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 WDR61Q9GZS3 305 aaKnown RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 C11orf68Q9H3H3 251 aaKnown RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 PARVBQ9HBI1 364 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 LYRM2Q9NU23 88 aaPredicted RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 FBXL12Q9NXK8 326 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 ICOSQ9Y6W8 199 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 DOCK9Q9BZ29 2069 aa3.21□□□□□ -1.9
VRK1-203ENST00000555067 BAZ1BQ9UIG0 1483 aaKnown RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 DICER1Q9UPY3 1922 aaKnown RBP3.21□□□□□ -1.9
VRK1-203ENST00000555067 CRB1P82279 1406 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 TRBV20OR9-2A0A075B6H5 130 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 IGKV1OR2-108A0A075B7D4 117 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 H3BMM0 161 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 PLA2G10O15496 165 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 ZNF324O75467 553 aaPredicted RBP3.2□□□□□ -1.9
VRK1-203ENST00000555067 SPI1P17947 270 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 NPY1RP25929 384 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 CRYBB3P26998 211 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 ATP6V0CP27449 155 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 MPV17P39210 176 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 TAS2R45P59539 299 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 OR8G1Q15617 311 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 MRPL51Q4U2R6 128 aaKnown RBP3.2□□□□□ -1.9
VRK1-203ENST00000555067 GLT8D1Q68CQ7 371 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 WDR59Q6PJI9 974 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 C12orf45Q8N5I9 185 aaPredicted RBP3.2□□□□□ -1.9
VRK1-203ENST00000555067 ZFAND2AQ8N6M9 145 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 OR13C8Q8NGS7 320 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 MRPL30Q8TCC3 161 aaKnown RBP3.2□□□□□ -1.9
VRK1-203ENST00000555067 UBE2WQ96B02 151 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 IGF2BP2-AS1Q96M15 143 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 GPER1Q99527 375 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 C1QTNF6Q9BXI9 259 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 SH3BGRL3Q9H299 93 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 ADAMTSL1Q8N6G6 1762 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 OTOFQ9HC10 1997 aa3.2□□□□□ -1.9
VRK1-203ENST00000555067 YTHDC2Q9H6S0 1430 aaKnown RBP3.19□□□□□ -1.9
VRK1-203ENST00000555067 MAP1LC3B2A6NCE7 125 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 PRORSD1PA6NEY8 169 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 A8MUU9 505 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 C9JCJ5 164 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 LECT2O14960 151 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 ARPC5O15511 151 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 SMIM17P0DL12 118 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 TBPL1P62380 186 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 ZNF816Q0VGE8 651 aaPredicted RBP3.19□□□□□ -1.9
VRK1-203ENST00000555067 SURF2Q15527 256 aaPredicted RBP3.19□□□□□ -1.9
VRK1-203ENST00000555067 C10orf91Q5T1B1 145 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 DAND5Q8N907 189 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 CD200R1Q8TD46 325 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 GPR119Q8TDV5 335 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 ZNF2Q9BSG1 426 aaPredicted RBP3.19□□□□□ -1.9
VRK1-203ENST00000555067 NKX6-2Q9C056 277 aaPredicted RBP3.19□□□□□ -1.9
VRK1-203ENST00000555067 MAP1LC3BQ9GZQ8 125 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 CCDC90BQ9GZT6 254 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 FAM107BQ9H098 131 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 ACER3Q9NUN7 267 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 SSR3Q9UNL2 185 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 GINS2Q9Y248 185 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 CPDO75976 1380 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 RALGAPA2Q2PPJ7 1873 aa3.19□□□□□ -1.9
VRK1-203ENST00000555067 NLRC5Q86WI3 1866 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 PEG3Q9GZU2 1588 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 LGALS1P09382 135 aaKnown RBP3.18□□□□□ -1.9
VRK1-203ENST00000555067 RBP1P09455 135 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 CISD3P0C7P0 127 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 SCGB1A1P11684 91 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 MDKP21741 143 aaPredicted RBP3.18□□□□□ -1.9
VRK1-203ENST00000555067 ZNF616Q08AN1 781 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 FUT5Q11128 374 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 SMCO1Q147U7 214 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 RHEBQ15382 184 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 DCUN1D2Q6PH85 259 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 SLC25A34Q6PIV7 304 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 EIF4E3Q8N5X7 224 aaKnown RBP3.18□□□□□ -1.9
VRK1-203ENST00000555067 ST6GALNAC3Q8NDV1 305 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 SLC25A40Q8TBP6 338 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 MAFIPQ8WZ33 124 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 AIF1LQ9BQI0 150 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 PBDC1Q9BVG4 233 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 C6orf62Q9GZU0 229 aaPredicted RBP3.18□□□□□ -1.9
VRK1-203ENST00000555067 OR5V1Q9UGF6 321 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 TRAPPC1Q9Y5R8 145 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 U3KQK5 164 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 DSCAMO60469 2012 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 PCM1Q15154 2024 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 DOCK6Q96HP0 2047 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 KIF1BO60333 1816 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 SETD5Q9C0A6 1442 aa3.18□□□□□ -1.9
VRK1-203ENST00000555067 TRIOBPQ9H2D6 2365 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 ARHGEF10O15013 1369 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 TRBV24-1A0A075B6N3 115 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 TRAV4A0A0B4J268 109 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 IGSF23A1L1A6 192 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 VPS37CA5D8V6 355 aaPredicted RBP3.17□□□□□ -1.9
VRK1-203ENST00000555067 DPRXA6NFQ7 191 aa3.17□□□□□ -1.9
VRK1-203ENST00000555067 SIGLEC16A6NMB1 481 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms