RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 GPR12P47775 334 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 ERVFC1-1P60608 527 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 C1orf194Q5T5A4 169 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 WDR31Q8NA23 367 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 SSMEM1Q8WWF3 244 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 CXXC4Q9H2H0 198 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 YTHDF2Q9Y5A9 579 aaKnown RBP13.75□□□□□ -0.21
XRCC3-209ENST00000554913 ZFHX4Q86UP3 3567 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 TIMP3P35625 211 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 CD177Q8N6Q3 437 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 DMXL1Q9Y485 3027 aa13.75□□□□□ -0.21
XRCC3-209ENST00000554913 TET2Q6N021 2002 aaPredicted RBP13.75□□□□□ -0.21
XRCC3-209ENST00000554913 C21orf140B9A014 251 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 SPINT2O43291 252 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 CBLN1P23435 193 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 VDAC2P45880 294 aaPredicted RBP13.74□□□□□ -0.21
XRCC3-209ENST00000554913 FABP6P51161 128 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 ATP1A1-AS1Q5TC04 95 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 OR10G8Q8NGN5 311 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
XRCC3-209ENST00000554913 BTF3L4Q96K17 158 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 TP53TG3Q9ULZ0 132 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 DSPP15924 2871 aaKnown RBP13.74□□□□□ -0.21
XRCC3-209ENST00000554913 M0R1X1 148 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 GFRA3O60609 400 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 MPDU1O75352 247 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 HPRT1P00492 218 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 HLA-DRB5Q30154 266 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 C1orf159Q96HA4 380 aa13.74□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF891A8MT65 544 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF705FA8MVS1 300 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 SLC17A3O00476 420 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 TIMM8AO60220 97 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 CXorf1O96002 111 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF705DP0CH99 300 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF705BP0CI00 300 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 CD46P15529 392 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 YPEL3P61236 119 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 SPATA31B1PQ5VZV4 182 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 TBX15Q96SF7 602 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 GNG12Q9UBI6 72 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 CFAP47Q6ZTR5 3102 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 TNFSF15O95150 251 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 HTD2P86397 168 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 SMIM21Q3B7S5 101 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 INO80CQ6PI98 192 aaPredicted RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 CMTM2Q8TAZ6 248 aa13.73□□□□□ -0.21
XRCC3-209ENST00000554913 SEPSECSQ9HD40 501 aaKnown RBP13.73□□□□□ -0.21
XRCC3-209ENST00000554913 K7EN84 100 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 ADH4P08319 380 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 OR10J1P30954 320 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 LINC00310P59036 64 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 RPP30P78346 268 aaKnown RBP13.72□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF718Q3SXZ3 478 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 LRP11Q86VZ4 500 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 FRMD6-AS1P0C7T7 363 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 RPL31P62899 125 aaKnown RBP13.72□□□□□ -0.21
XRCC3-209ENST00000554913 RELBQ01201 579 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF90Q03938 601 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 MORN2Q502X0 79 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 TMEM164Q5U3C3 297 aa13.72□□□□□ -0.21
XRCC3-209ENST00000554913 FOXH1O75593 365 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 GCHFRP30047 84 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 PRDX2P32119 198 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF134P52741 427 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 Q6ZWC4 215 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 LRRC29Q8WV35 223 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 ZCCHC14Q8WYQ9 949 aaKnown RBP13.71□□□□□ -0.21
XRCC3-209ENST00000554913 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 M0R143 59 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 M0R296 226 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
XRCC3-209ENST00000554913 G0S2P27469 103 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 UTF1Q5T230 341 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.21
XRCC3-209ENST00000554913 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
XRCC3-209ENST00000554913 ARSJQ5FYB0 599 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-209ENST00000554913 C1orf229Q6ZS94 237 aaPredicted RBP13.7□□□□□ -0.22
XRCC3-209ENST00000554913 TMEM106BQ9NUM4 274 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 TMEM140Q9NV12 185 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 TCF19Q9Y242 345 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
XRCC3-209ENST00000554913 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 IGKV3-15P01624 115 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 ERVK-16P61578 105 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 SELENOTP62341 195 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 EFNB3Q15768 340 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 Q6ZT83 130 aa13.7□□□□□ -0.22
XRCC3-209ENST00000554913 FAM90A1Q86YD7 464 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms