RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FAM181BA6NEQ2 426 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 GAGE10A6NGK3 116 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 BMPR1BO00238 502 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 CELA3BP08861 270 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 DEFA4P12838 97 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 SSR4P51571 173 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 HES4Q9HCC6 221 aa13.11□□□□□ -0.31
SYNE3-203ENST00000554873 K7EN84 100 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 CLDN1O95832 211 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 COX6A1P12074 109 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 UBE2G1P62253 170 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 AAED1Q7RTV5 226 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 YRDCQ86U90 279 aaKnown RBP13.1□□□□□ -0.31
SYNE3-203ENST00000554873 OR1N2Q8NGR9 330 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 SLC25A40Q8TBP6 338 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 ZNF576Q9H609 170 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 ZNF391Q9UJN7 358 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 GOSR1O95249 250 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 B3GALT5-AS1P59052 145 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 CX3CL1P78423 397 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 TFF3Q07654 80 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 EBLN2Q6P2I7 272 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 FOXB1Q99853 325 aa13.1□□□□□ -0.31
SYNE3-203ENST00000554873 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 GNG7O60262 68 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 PPIAL4GP0DN37 164 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 KIR2DS4P43632 304 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 KIR2DS1Q14954 304 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 RAB1CQ92928 201 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 ST6GALNAC6Q969X2 333 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
SYNE3-203ENST00000554873 WDR54Q9H977 334 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 WNT16Q9UBV4 365 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 CDIPTO14735 213 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 GPR6P46095 362 aaPredicted RBP13.09□□□□□ -0.31
SYNE3-203ENST00000554873 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 CFAP161Q6P656 301 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
SYNE3-203ENST00000554873 OR1L1Q8NH94 360 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 OR51B2Q9Y5P1 312 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 V9GYV3 84 aa13.09□□□□□ -0.31
SYNE3-203ENST00000554873 HLA-DQA1P01909 254 aa13.08□□□□□ -0.31
SYNE3-203ENST00000554873 PSG3Q16557 428 aa13.08□□□□□ -0.31
SYNE3-203ENST00000554873 SLC25A34Q6PIV7 304 aa13.08□□□□□ -0.31
SYNE3-203ENST00000554873 TP73-AS1Q9UF72 201 aa13.08□□□□□ -0.31
SYNE3-203ENST00000554873 MRPS17Q9Y2R5 130 aaKnown RBP13.08□□□□□ -0.31
SYNE3-203ENST00000554873 LY96Q9Y6Y9 160 aa13.08□□□□□ -0.31
SYNE3-203ENST00000554873 IGKV1-6A0A0C4DH72 117 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 A0A0G2JMM0 328 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 A0A1W2PPB8 328 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 KIR3DP1A8MWS1 328 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 CYC1P08574 325 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 CA7P43166 264 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 DUSP23Q9BVJ7 150 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 FSCN3Q9NQT6 498 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-203ENST00000554873 ZNF407Q9C0G0 2248 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 A6NJY4 79 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 RAB29O14966 203 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 CXCL13O43927 109 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 KLF7O75840 302 aaPredicted RBP13.08□□□□□ -0.32
SYNE3-203ENST00000554873 BCL3P20749 454 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 NPY1RP25929 384 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
SYNE3-203ENST00000554873 ZNHIT1O43257 154 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 HSBP1O75506 76 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 IGFBP4P22692 258 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
SYNE3-203ENST00000554873 GGNQ86UU5 652 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 M0R2Z0 102 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 DNPH1O43598 174 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 SPINK4O60575 86 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 AMY1AP04745 511 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 TGFBR3Q03167 851 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 SPEM1Q8N4L4 309 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 ABI3Q9P2A4 366 aa13.07□□□□□ -0.32
SYNE3-203ENST00000554873 A0A1W2PPV4 95 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 C9JCJ5 164 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 SSTR5P35346 364 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 TNXAQ16473 311 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 C18orf32Q8TCD1 76 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 COMMD5Q9GZQ3 224 aa13.06□□□□□ -0.32
SYNE3-203ENST00000554873 FGF23Q9GZV9 251 aaPredicted RBP13.06□□□□□ -0.32
SYNE3-203ENST00000554873 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms