RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 ARFGEF3Q5TH69 2177 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 APOMO95445 188 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 MSNP26038 577 aaKnown RBP0.69□□□□□ -2.3
SCFD1-214ENST00000554819 DDTP30046 118 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 DNM1P34Q6PK57 102 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 SYCE1Q8N0S2 351 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 RIBC1Q8N443 379 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-214ENST00000554819 C15orf53Q8NAA6 179 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 PACRGQ96M98 296 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-214ENST00000554819 SPANXB1Q9NS25 103 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-214ENST00000554819 NAT8Q9UHE5 227 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 GLI3P10071 1580 aa0.69□□□□□ -2.3
SCFD1-214ENST00000554819 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 TMEM269A0A1B0GVZ9 245 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 GOLGA6L10A6NI86 522 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 NPPAP01160 153 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 PMS2P3Q13401 168 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 JOSD1Q15040 202 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-214ENST00000554819 NDUFA5Q16718 116 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 SDHAF4Q5VUM1 108 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 NAA40Q86UY6 237 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 UMODL1-AS1Q8N2C9 162 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 UBL4BQ8N7F7 174 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 ACOT12Q8WYK0 555 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 TESCQ96BS2 214 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 GNPNAT1Q96EK6 184 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-214ENST00000554819 EURLQ9NYK6 297 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 HEATR5BQ9P2D3 2071 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
SCFD1-214ENST00000554819 EIF4G1Q04637 1599 aaKnown RBP0.67□□□□□ -2.3
SCFD1-214ENST00000554819 COX7A2LO14548 114 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 TFPTP0C1Z6 253 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 CLDN12P56749 244 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 RPL30P62888 115 aaKnown RBP0.67□□□□□ -2.3
SCFD1-214ENST00000554819 C10orf55Q5SWW7 151 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 FAM27BQ5VT28 67 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 CD302Q8IX05 232 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 OR8B3Q8NGG8 313 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 HAVCR2Q8TDQ0 301 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 MS4A6AQ9H2W1 248 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 HRASLSQ9HDD0 168 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 PRELID1Q9Y255 219 aa0.67□□□□□ -2.3
SCFD1-214ENST00000554819 NCOA6Q14686 2063 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 MICAL3Q7RTP6 2002 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 ERICH2A1L162 156 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 TRPC5OSA6NMA1 111 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 SDCBPO00560 298 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 GEMIN2O14893 280 aaKnown RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 KRT75O95678 551 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 CCL5P13501 91 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 HIST1H1CP16403 213 aaKnown RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 CXCR4P61073 352 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 CDK10Q15131 360 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 SAPCD1Q5SSQ6 148 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 SBSNQ6UWP8 590 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 FAM19A5Q7Z5A7 132 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 C12orf29Q8N999 325 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 C9orf163Q8N9P6 203 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 JOSD2Q8TAC2 188 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 DHRS9Q9BPW9 319 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 MRPL57Q9BQC6 102 aaKnown RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 REG4Q9BYZ8 158 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 CHMP4BQ9H444 224 aaKnown RBP0.66□□□□□ -2.3
SCFD1-214ENST00000554819 SPACA1Q9HBV2 294 aa0.66□□□□□ -2.3
SCFD1-214ENST00000554819 SETD5Q9C0A6 1442 aa0.65□□□□□ -2.3
SCFD1-214ENST00000554819 TRBV10-2A0A0K0K1G8 114 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 HPGDSO60760 199 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 C5orf46Q6UWT4 87 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 TBC1D19Q8N5T2 526 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 ZNF676Q8N7Q3 588 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 OR7G1Q8NGA0 311 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 OR2T27Q8NH04 317 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 DCUN1D5Q9BTE7 237 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 DERL2Q9GZP9 239 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 TIMM22Q9Y584 194 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 GMEB1Q9Y692 573 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 LHFPL6Q9Y693 200 aa0.65□□□□□ -2.31
SCFD1-214ENST00000554819 HEATR5AQ86XA9 2040 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 TINCRA0A1B0GVN0 87 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 IQCF5A8MTL0 148 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 HSBP1L1C9JCN9 74 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 NSA2O95478 260 aaKnown RBP0.64□□□□□ -2.31
SCFD1-214ENST00000554819 CSN1S1P47710 185 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 POLR2GP62487 172 aaKnown RBP eCLIP0.64□□□□□ -2.31
SCFD1-214ENST00000554819 FAM78BQ5VT40 261 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 SSX8Q7RTT4 187 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 DHFR2Q86XF0 187 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 GID4Q8IVV7 300 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 SLC22A24Q8N4F4 322 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 SERPINI1Q99574 410 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 GPR84Q9NQS5 396 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 RSL24D1Q9UHA3 163 aaKnown RBP0.64□□□□□ -2.31
SCFD1-214ENST00000554819 AK3Q9UIJ7 227 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 TONSLQ96HA7 1378 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 GREB1Q4ZG55 1949 aa0.64□□□□□ -2.31
SCFD1-214ENST00000554819 RP1P56715 2156 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms