RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 B9D2Q9BPU9 175 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 FAM212BQ9NTI7 297 aaPredicted RBP8.31□□□□□ -1.08
SHMT2-215ENST00000554656 OR1A1Q9P1Q5 309 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 GAB2Q9UQC2 676 aa8.31□□□□□ -1.08
SHMT2-215ENST00000554656 GOSR2O14653 212 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 HSD17B6O14756 317 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 MPPED1O15442 326 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 REG1BP48304 166 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 RAB7AP51149 207 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF816Q0VGE8 651 aaPredicted RBP8.3□□□□□ -1.08
SHMT2-215ENST00000554656 EBI3Q14213 229 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 TMEM187Q14656 261 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF818PQ6ZRF7 136 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 LCNL1Q6ZST4 164 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 C5orf24Q7Z6I8 188 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 SLC35E3Q7Z769 313 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 STPG2Q8N412 459 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF645Q8N7E2 425 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 KLHL30-AS1Q8NEE0 82 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 IL22RA2Q969J5 263 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 RAX2Q96IS3 184 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 OR2S2Q9NQN1 319 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 CCL28Q9NRJ3 127 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 PIPOXQ9P0Z9 390 aa8.3□□□□□ -1.08
SHMT2-215ENST00000554656 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
SHMT2-215ENST00000554656 STAB2Q8WWQ8 2551 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 C3orf85A0A1B0GTC6 90 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 NUDT19A8MXV4 375 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 H0Y980 276 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 OR8U9P0C7N5 309 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 F2RP25116 425 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 UCP1P25874 307 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 FGL1Q08830 312 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 DEFB136Q30KP8 78 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 ANKRD55Q3KP44 614 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 MORN2Q502X0 79 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 PHLDA2Q53GA4 152 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 GSG1LQ6UXU4 331 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF66Q6ZN08 573 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 LGI3Q8N145 548 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 PRR18Q8N4B5 295 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 Q8N9W7 124 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.29□□□□□ -1.08
SHMT2-215ENST00000554656 OR52L2PQ8NGH6 319 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 OR2T35Q8NGX2 323 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 OR10X1Q8NGY0 326 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 OR8U1Q8NH10 309 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 GLYATL2Q8WU03 294 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 ST6GALNAC6Q969X2 333 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
SHMT2-215ENST00000554656 NMES1Q9C002 83 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 PLSCR3Q9NRY6 295 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
SHMT2-215ENST00000554656 GNG12Q9UBI6 72 aa8.29□□□□□ -1.08
SHMT2-215ENST00000554656 IGHV3-43A0A0B4J1X8 118 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 SLC31A2O15432 143 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 PGLYRP1O75594 196 aaPredicted RBP8.28□□□□□ -1.08
SHMT2-215ENST00000554656 CDS2O95674 445 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 IFNA21P01568 189 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 RPLP1P05386 114 aaKnown RBP8.28□□□□□ -1.08
SHMT2-215ENST00000554656 OR5AC1P0C628 307 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 IGHV3-43DP0DP04 118 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 RPA2P15927 270 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 PPP1CCP36873 323 aaKnown RBP8.28□□□□□ -1.08
SHMT2-215ENST00000554656 MYCNOSP40205 109 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 GPR12P47775 334 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 H2BFSP57053 126 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 CD69Q07108 199 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 CATR1Q13166 79 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 MOB3BQ86TA1 216 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 TBC1D26Q86UD7 250 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 TGIF2LXQ8IUE1 241 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 ZNF695Q8IW36 515 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 C8orf31Q8N9H6 132 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 TMEM56Q96MV1 263 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 AGMATQ9BSE5 352 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 GPR61Q9BZJ8 451 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 ZFP57Q9NU63 452 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 TMED3Q9Y3Q3 217 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 RYR3Q15413 4870 aa8.28□□□□□ -1.08
SHMT2-215ENST00000554656 HMSDA8MTL9 139 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 CCL24O00175 119 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 IGLV2-14P01704 120 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 GAPDHP04406 335 aaKnown RBP8.27□□□□□ -1.09
SHMT2-215ENST00000554656 CFHR3Q02985 330 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 GNMTQ14749 295 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 COMMD1Q8N668 190 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 DRAXINQ8NBI3 349 aaPredicted RBP8.27□□□□□ -1.09
SHMT2-215ENST00000554656 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 DPF1Q92782 380 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 C2orf50Q96LR7 162 aa8.27□□□□□ -1.09
SHMT2-215ENST00000554656 HSD17B10Q99714 261 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms