RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZADH2Q8N4Q0 377 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 TCTEX1D1Q8N7M0 179 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 PPP1R35Q8TAP8 253 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 IFI27L2Q9H2X8 130 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 MS4A5Q9H3V2 200 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 JPT1Q9UK76 154 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 TMEM250H0YL14 139 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 IGHV2-70P01814 119 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 SFTPCP11686 197 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 NPPCP23582 126 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 LOXL3P58215 753 aa12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-203ENST00000554514 TRBV24-1A0A075B6N3 115 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 WDR83OSQ9Y284 106 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 DSCAMO60469 2012 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 SPCS3P61009 180 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 VWC2Q2TAL6 325 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 LYG1Q8N1E2 194 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 Q8N7P7 452 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 ZNRD1Q9P1U0 126 aa12.96□□□□□ -0.33
ARHGEF40-203ENST00000554514 NDUFB4O95168 129 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 PFN1P07737 140 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM3BP58499 235 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 TREML4Q6UXN2 200 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM90A1Q86YD7 464 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 YPEL1O60688 119 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 RELBQ01201 579 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 SNRNP40Q96DI7 357 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 YPEL2Q96QA6 119 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 PFDN5Q99471 154 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 RNF224P0DH78 156 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 ARL14EPLP0DKL9 152 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 C22orf34Q6ZV56 151 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 TMEM37Q8WXS4 190 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 MGST2Q99735 147 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 TCF19Q9Y242 345 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 PXMP4Q9Y6I8 212 aa12.95□□□□□ -0.34
ARHGEF40-203ENST00000554514 A0A0U1RQK1 487 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 GNB1P62873 340 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 CCL13Q99616 98 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 TUBG2Q9NRH3 451 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 DCHS1Q96JQ0 3298 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 GFRA3O60609 400 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 PRSS8Q16651 343 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 RHOVQ96L33 236 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 PACRGQ96M98 296 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM215AQ9Y5M1 114 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
ARHGEF40-203ENST00000554514 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 ELOA3CA0A087WX78 387 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 MBD3L4A6NDZ8 208 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 MBD3L3A6NE82 208 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 MBD3L5A6NJ08 208 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 K7EM74 188 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 RPP30P78346 268 aaKnown RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM78BQ5VT40 261 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 FAM216BQ8N7L0 139 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 MBD3L2Q8NHZ7 208 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 SRD5A3Q9H8P0 318 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 FUT9Q9Y231 359 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 PHOX2AO14813 284 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 LY86O95711 162 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 HRASP01112 189 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 VDAC2P45880 294 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 GFOD1Q9NXC2 390 aa12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 ZFHX2Q9C0A1 2572 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-203ENST00000554514 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 C1QTNF9P0C862 333 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 TNFAIP6P98066 277 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 ANKRD39Q53RE8 183 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 ZNF114Q8NC26 417 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 HIST1H2BLQ99880 126 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 GGTLC1Q9BX51 225 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 TNCP24821 2201 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 XKRY2A2RUG3 117 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 F2RL2O00254 374 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 GAMTQ14353 236 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 TIMM23BQ5SRD1 257 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 SPATA31B1PQ5VZV4 182 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 OR4A47Q6IF82 309 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 ZCCHC24Q8N2G6 241 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 OR4S2Q8NH73 311 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 PRO1933Q9H354 126 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 ATMQ13315 3056 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 MMP23AO75900 390 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 GLRXP35754 106 aa12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 MRPS11P82912 194 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-203ENST00000554514 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms