RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 C17orf98A8MV24 154 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 C15orf65H3BRN8 121 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 DLL1O00548 723 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 G6PCP35575 357 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 RND2P52198 227 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 SMDT1Q9H4I9 107 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 SPINT2O43291 252 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 LINC00614P0C842 121 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 BPIFB3P59826 476 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 GPR157Q5UAW9 335 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 TMEM252Q8N6L7 170 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 CCL17Q92583 94 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 UTP20O75691 2785 aaKnown RBP9.68□□□□□ -0.86
SHMT2-212ENST00000554467 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 LINC00473A8K010 186 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 GCGP01275 180 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 SPINK9Q5DT21 86 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF645Q8N7E2 425 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 SPIN2AQ99865 258 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 SPIN2BQ9BPZ2 258 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 VKORC1Q9BQB6 163 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 PLEKHF2Q9H8W4 249 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 IL19Q9UHD0 177 aa9.68□□□□□ -0.86
SHMT2-212ENST00000554467 POLR3KQ9Y2Y1 108 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-212ENST00000554467 TMPRSS2O15393 492 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 S1PR2O95136 353 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 TNFSF4P23510 183 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 FGF8P55075 233 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-212ENST00000554467 BRWD1-AS2P59051 145 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF266Q14584 549 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 RPL39P5Q59GN2 51 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 LFNGQ8NES3 379 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 NUP37Q8NFH4 326 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 ZNRD1Q9P1U0 126 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 WSB1Q9Y6I7 421 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 MGST3O14880 152 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 HMGB3O15347 200 aaKnown RBP9.67□□□□□ -0.86
SHMT2-212ENST00000554467 METTL15P1P0C7V9 234 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 MMP9P14780 707 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF134P52741 427 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 UCNP55089 124 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 ELLP55199 621 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-212ENST00000554467 LCN15Q6UWW0 184 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 SLC35E3Q7Z769 313 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 ODF3L1Q8IXM7 274 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 NIPSNAP3BQ9BS92 247 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 LIN7CQ9NUP9 197 aaKnown RBP9.67□□□□□ -0.86
SHMT2-212ENST00000554467 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
SHMT2-212ENST00000554467 C17orf100A8MU93 164 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 E7EQL1 145 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 IRF2P14316 349 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 DFFBO76075 338 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 CLDN14O95500 239 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 PLA2G5P39877 138 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 RBX1P62877 108 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 GNB2P62879 340 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 ID3Q02535 119 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 KLRB1Q12918 225 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 WDR25Q64LD2 544 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-212ENST00000554467 FAM90A2PQ658T7 463 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 RSG1Q9BU20 258 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 DSCAML1Q8TD84 2053 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 TRBV24-1A0A075B6N3 115 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 A0A1B0GU03 582 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-212ENST00000554467 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 SHISA9B4DS77 424 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 CLDN1O95832 211 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
SHMT2-212ENST00000554467 GZMHP20718 246 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 CFHR2P36980 270 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 RPL29P47914 159 aaKnown RBP9.66□□□□□ -0.86
SHMT2-212ENST00000554467 PAX9P55771 341 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 RPL23AP62750 156 aaKnown RBP9.66□□□□□ -0.86
SHMT2-212ENST00000554467 CLDND2Q8NHS1 167 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 GAFA1Q96PS6 74 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 AGMATQ9BSE5 352 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 C11orf1Q9H5F2 150 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 SAP30LQ9HAJ7 183 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
SHMT2-212ENST00000554467 LYNX1G3V0Z9 82 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 PROP1O75360 226 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 MMP23AO75900 390 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 LYNX1P0DP58 116 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 GATA4P43694 442 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
SHMT2-212ENST00000554467 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 STUMQ69YW2 141 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 C1orf229Q6ZS94 237 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-212ENST00000554467 VKORC1L1Q8N0U8 176 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
SHMT2-212ENST00000554467 CALYQ9NYX4 217 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 KIAA1456Q9P272 454 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms