RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SAT2Q96F10 170 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 RNF126Q9BV68 326 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 RIMS4Q9H426 269 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 BANF2Q9H503 90 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 UFSP2Q9NUQ7 469 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 C14orf166Q9Y224 244 aaKnown RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 KCNIP3Q9Y2W7 256 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 SORL1Q92673 2214 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 LOC100509620A0A075B734 347 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 TRBV6-6A0A0A6YYG2 114 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 DUXBA0A1W2PPF3 345 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 C5orf51A6NDU8 294 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 CXorf65A6NEN9 183 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 CRYM-AS1A6NIL9 109 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 PDCD6O75340 191 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 DIRAS3O95661 229 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 IFNA21P01568 189 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 GYPAP02724 150 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 RLN2P04090 185 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 GAPDHP04406 335 aaKnown RBP4.41□□□□□ -1.7
ATXN3-226ENST00000554350 CSN2P05814 226 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 OR5H8P0DN80 308 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 PSG1P11464 419 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 SERPINA2P20848 420 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 FUT3P21217 361 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 TUBG1P23258 451 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 ACKR3P25106 362 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 RND3P61587 244 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 RPL23AP62750 156 aaKnown RBP4.41□□□□□ -1.7
ATXN3-226ENST00000554350 SRPXP78539 464 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 PMS2P11Q13670 270 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 MPV17LQ2QL34 196 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 ALKAL2Q6UX46 152 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 KCTD9Q7L273 389 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 MKXQ8IYA7 352 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 FGFRL1Q8N441 504 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 C11orf42Q8N5U0 333 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 OR5A2Q8NGI9 324 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 AKR7LQ8NHP1 331 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 H1FXQ92522 213 aaKnown RBP4.41□□□□□ -1.7
ATXN3-226ENST00000554350 MARC2Q969Z3 335 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 APOBEC3DQ96AK3 386 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-226ENST00000554350 ABHD14BQ96IU4 210 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 POM121L2Q96KW2 1035 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 SPACA5Q96QH8 159 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 CMSS1Q9BQ75 279 aaKnown RBP4.41□□□□□ -1.7
ATXN3-226ENST00000554350 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 ZNF286AQ9HBT8 521 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 SPACA1Q9HBV2 294 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 TUBG2Q9NRH3 451 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 EHFQ9NZC4 300 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 MBD2Q9UBB5 411 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 PITPNC1Q9UKF7 332 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 TCF19Q9Y242 345 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 MPC1Q9Y5U8 109 aa4.41□□□□□ -1.7
ATXN3-226ENST00000554350 KIAA2026Q5HYC2 2103 aa4.4□□□□□ -1.7
ATXN3-226ENST00000554350 HERC1Q15751 4861 aa4.4□□□□□ -1.7
ATXN3-226ENST00000554350 A0A1W2PP11 408 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 PQLC2LA1A4F0 135 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 OR5B21A6NL26 309 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CCL24O00175 119 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 LGALS8O00214 317 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 FSTL3O95633 263 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 FCGR3AP08637 254 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ACAA1P09110 424 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 RBMY1A1P0DJD3 496 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ANOS1P23352 680 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 GLRA1P23415 457 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CNTFRP26992 372 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CEBPDP49716 269 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 RBM11P57052 281 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF92Q03936 586 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 RBM39Q14498 530 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 IL13RA2Q14627 380 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CEACAM21Q3KPI0 293 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 IL34Q6ZMJ4 242 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 SLC38A6Q8IZM9 456 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 FAM71E2Q8N5Q1 922 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 Q8N7P7 452 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CCDC71LQ8N9Z2 235 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 OR5L1Q8NGL2 311 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 OR10K1Q8NGX5 313 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 PIFOQ8TCI5 191 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 CASTOR1Q8WTX7 329 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 IL22RA2Q969J5 263 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 MOB3AQ96BX8 217 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 SEC22AQ96IW7 307 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 P2RX4Q99571 388 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 FAM110AQ9BQ89 295 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF2Q9BSG1 426 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF471Q9BX82 626 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 PKIBQ9C010 78 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 WDR13Q9H1Z4 485 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 METTL8Q9H825 291 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 RETNQ9HD89 108 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 C12orf4Q9NQ89 552 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms