RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FAM208BQ5VWN6 2430 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ASPMQ8IZT6 3477 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ZNF142P52746 1687 aaPredicted RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 DISP2A7MBM2 1401 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TNS3Q68CZ2 1445 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 FMN1Q68DA7 1419 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 PRDM15P57071 1507 aaPredicted RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 MAP3K1Q13233 1512 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 DENND4AQ7Z401 1863 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 BORCS7-ASMTA0A0B4J1R7 106 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 IGHV2OR16-5A0A0B4J2B6 119 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 IGHV7-4-1A0A0J9YVY3 117 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 LOC100130705A0A1B0GUX0 176 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 A0A1B0GX51 115 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM72A0PK05 275 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TSPAN11A1L157 253 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM189A5PLL7 270 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 BTNL10A8MVZ5 291 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 J3QRK9 145 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 K7EMT4 169 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR7C2O60412 319 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 KCNK2O95069 426 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 CDS2O95674 445 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GCGP01275 180 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 HBE1P02100 147 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OPN1SWP03999 348 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GYPCP04921 128 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SMIM17P0DL12 118 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 IL7P13232 177 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 LGALS3P17931 250 aaKnown RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 RPS3P23396 243 aaKnown RBP eCLIP1.42□□□□□ -2.18
VRK1-202ENST00000553683 PRTN3P24158 256 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SRIP30626 198 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GLRXP35754 106 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ETV6P41212 452 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GABRA2P47869 451 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 REG1BP48304 166 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 RAB5CP51148 216 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 P2RX1P51575 399 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 HCCSP53701 268 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 RAB5BP61020 215 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 HSPE1P61604 102 aaKnown RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 MRPS10P82664 201 aaKnown RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 CDK6Q00534 326 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 HIST1H1AQ02539 215 aaPredicted RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 FABP9Q0Z7S8 132 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 FUT5Q11128 374 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 IL15RAQ13261 267 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 IHHQ14623 411 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ZNF846Q147U1 533 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR8B8Q15620 311 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR7A5Q15622 319 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 NEDD8Q15843 81 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SNRNP35Q16560 246 aaKnown RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM241Q24JQ0 296 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ACOT6Q3I5F7 207 aaPredicted RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 MORN2Q502X0 79 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 MPV17L2Q567V2 206 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 RNASE13Q5GAN3 156 aaKnown RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 FAM74A1Q5RGS3 127 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 COL5A1-AS1Q5SY13 56 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 LDLRAD2Q5SZI1 272 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 C6orf52Q5T4I8 152 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TEX36Q5VZQ5 186 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SPATA31B1PQ5VZV4 182 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ZFAND6Q6FIF0 208 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GLYATQ6IB77 296 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 DCUN1D2Q6PH85 259 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 FA2HQ7L5A8 372 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 C1orf158Q8N1D5 194 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM256Q8N2U0 113 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ZNF664Q8N3J9 261 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SPICQ8N5J4 248 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SLC35G3Q8N808 338 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 WDR31Q8NA23 367 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 PLPP5Q8NEB5 264 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 C1orf64Q8NEQ6 169 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR4S1Q8NGB4 309 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR1L8Q8NGR8 309 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR6K6Q8NGW6 343 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR5B3Q8NH48 314 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR13C6PQ8NH95 151 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 ZNF420Q8TAQ5 688 aaPredicted RBP1.42□□□□□ -2.18
VRK1-202ENST00000553683 CYGBQ8WWM9 190 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 GPR146Q96CH1 333 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 CCDC115Q96NT0 180 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 OR52B2Q96RD2 323 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TP53RKQ96S44 253 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 MGLLQ99685 303 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 HSPB9Q9BQS6 159 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 AGMATQ9BSE5 352 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 FAAP24Q9BTP7 215 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 DOHHQ9BU89 302 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 EFCAB11Q9BUY7 163 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 SUCNR1Q9BXA5 334 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM126AQ9H061 195 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 TMEM133Q9H2Q1 129 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 EFCAB1Q9HAE3 211 aa1.42□□□□□ -2.18
VRK1-202ENST00000553683 KCNJ16Q9NPI9 418 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms