RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 RTBDNQ9BSG5 229 aaPredicted RBP10.91□□□□□ -0.66
TUBB3-202ENST00000553656 NAA60Q9H7X0 242 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
TUBB3-202ENST00000553656 BET1LQ9NYM9 111 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 WSB1Q9Y6I7 421 aa10.91□□□□□ -0.66
TUBB3-202ENST00000553656 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 KRASP01116 189 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 KRTAP10-3P60369 221 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 NDPQ00604 133 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 POU2AF1Q16633 256 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 ZNF585BQ52M93 769 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 TEX38Q6PEX7 206 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 PUSL1Q8N0Z8 303 aaKnown RBP10.9□□□□□ -0.66
TUBB3-202ENST00000553656 SGMS2Q8NHU3 365 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
TUBB3-202ENST00000553656 TMEM167AQ8TBQ9 72 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 TMEM140Q9NV12 185 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 VSIG4Q9Y279 399 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 KCNIP3Q9Y2W7 256 aa10.9□□□□□ -0.66
TUBB3-202ENST00000553656 TCRBV4S1A1TA0A5B7 111 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 CRYM-AS1A6NIL9 109 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 SNAPC5O75971 98 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 OPN1MWP04001 364 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 OPN1MW2P0DN77 364 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 OPN1MW3P0DN78 364 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 CD28P10747 220 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 ANXA3P12429 323 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 AKR1C4P17516 323 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 MAS1LP35410 378 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 G6PCP35575 357 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 CCR6P51684 374 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 AKR1C2P52895 323 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 RPL8P62917 257 aaKnown RBP10.89□□□□□ -0.67
TUBB3-202ENST00000553656 DHODHQ02127 395 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 SP6Q3SY56 376 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 CXorf66Q5JRM2 361 aaPredicted RBP10.89□□□□□ -0.67
TUBB3-202ENST00000553656 UNQ5815/PRO19632Q6UWF5 114 aa10.89□□□□□ -0.67
TUBB3-202ENST00000553656 WIPF2Q8TF74 440 aaPredicted RBP10.89□□□□□ -0.67
TUBB3-202ENST00000553656 FAM103A1Q9BTL3 118 aaKnown RBP10.89□□□□□ -0.67
TUBB3-202ENST00000553656 FOXA2Q9Y261 457 aaPredicted RBP10.89□□□□□ -0.67
TUBB3-202ENST00000553656 A0A1W2PN81 502 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 G3V318 75 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 UPK2O00526 184 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 ARPC1BO15143 372 aaKnown RBP10.88□□□□□ -0.67
TUBB3-202ENST00000553656 LYRM1O43325 122 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 OR5AC1P0C628 307 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 HLA-GP17693 338 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 CHRNA7P36544 502 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 CRIP2P52943 208 aaPredicted RBP10.88□□□□□ -0.67
TUBB3-202ENST00000553656 MZT2BQ6NZ67 158 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM65Q6PI78 240 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 H2BFWTQ7Z2G1 175 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 CENPSQ8N2Z9 138 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 ADAD2Q8NCV1 583 aaKnown RBP10.88□□□□□ -0.67
TUBB3-202ENST00000553656 LFNGQ8NES3 379 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 SRSF12Q8WXF0 261 aaKnown RBP10.88□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM68Q96MH6 324 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 TSC22D3Q99576 134 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 SPIN2AQ99865 258 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
TUBB3-202ENST00000553656 SPIN2BQ9BPZ2 258 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 FBXO7Q9Y3I1 522 aa10.88□□□□□ -0.67
TUBB3-202ENST00000553656 PIGBOS1A0A0B4J2F0 54 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 M0QZ24 198 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 UPK1BO75841 260 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 NDUFB6O95139 128 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 IGHG4P01861 327 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 ELANEP08246 267 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 PF4V1P10720 104 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 UCP1P25874 307 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
TUBB3-202ENST00000553656 FOXE3Q13461 319 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 C2orf68Q2NKX9 166 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 AKIRIN2Q53H80 203 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 NDUFA11Q86Y39 141 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 ZNF695Q8IW36 515 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 OR5M8Q8NGP6 311 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 RRNAD1Q96FB5 475 aaKnown RBP10.87□□□□□ -0.67
TUBB3-202ENST00000553656 FYTTD1Q96QD9 318 aaKnown RBP10.87□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM222Q9H0R3 208 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 TSSC4Q9Y5U2 329 aaPredicted RBP10.87□□□□□ -0.67
TUBB3-202ENST00000553656 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
TUBB3-202ENST00000553656 MSGN1A6NI15 193 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 PLA2G10O15496 165 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 RBMXL2O75526 392 aaKnown RBP10.86□□□□□ -0.67
TUBB3-202ENST00000553656 FGF2P09038 288 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
TUBB3-202ENST00000553656 VAMP1P23763 118 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 SRPXP78539 464 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 SSBP2P81877 361 aaPredicted RBP10.86□□□□□ -0.67
TUBB3-202ENST00000553656 CD83Q01151 205 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 CFHR3Q02985 330 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 MRGPRG-AS1Q2M3A8 158 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM128Q5BJH2 165 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 C10orf55Q5SWW7 151 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms