RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CDX1P47902 265 aaPredicted RBP18.42■□□□□ 0.54
TDP1-205ENST00000553527 GNB1P62873 340 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 PPP1R27Q86WC6 154 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 RNF152Q8N8N0 203 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 OR13C8Q8NGS7 320 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 OR51H1Q8NH63 302 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 ZFAND1Q8TCF1 268 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 MRGPRFQ96AM1 343 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 ZNF486Q96H40 463 aaPredicted RBP18.42■□□□□ 0.54
TDP1-205ENST00000553527 RAX2Q96IS3 184 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 HARBI1Q96MB7 349 aa18.42■□□□□ 0.54
TDP1-205ENST00000553527 NAP1L6A6NFF2 107 aa18.41■□□□□ 0.54
TDP1-205ENST00000553527 FCGR3BO75015 233 aa18.41■□□□□ 0.54
TDP1-205ENST00000553527 TMEM267Q0VDI3 215 aaPredicted RBP18.41■□□□□ 0.54
TDP1-205ENST00000553527 SURF2Q15527 256 aaPredicted RBP18.41■□□□□ 0.54
TDP1-205ENST00000553527 KPRPQ5T749 579 aaPredicted RBP18.41■□□□□ 0.54
TDP1-205ENST00000553527 OR5B12Q96R08 314 aa18.41■□□□□ 0.54
TDP1-205ENST00000553527 C7orf50Q9BRJ6 194 aaKnown RBP18.41■□□□□ 0.54
TDP1-205ENST00000553527 SLC2A9Q9NRM0 540 aa18.41■□□□□ 0.54
TDP1-205ENST00000553527 C14orf166Q9Y224 244 aaKnown RBP18.41■□□□□ 0.54
TDP1-205ENST00000553527 PGLYRP1O75594 196 aaPredicted RBP18.4■□□□□ 0.54
TDP1-205ENST00000553527 SPDEFO95238 335 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 CNIH1O95406 144 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 CRYZL1O95825 349 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 IGLV1-40P01703 118 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 IGLV2-23P01705 113 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 EGR2P11161 476 aaPredicted RBP18.4■□□□□ 0.54
TDP1-205ENST00000553527 PI3P19957 117 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 KIR2DS2P43631 304 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 LGALS7P47929 136 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 PJVKQ0ZLH3 352 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 FXYD3Q14802 87 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 UNQ5815/PRO19632Q6UWF5 114 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 ZNF562Q6V9R5 426 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 MINDY2Q8NBR6 621 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 LFNGQ8NES3 379 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 OR4S2Q8NH73 311 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 GRPEL2Q8TAA5 225 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 RCC1LQ96I51 464 aaKnown RBP18.4■□□□□ 0.54
TDP1-205ENST00000553527 P2RX4Q99571 388 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 NUBP2Q9Y5Y2 271 aa18.4■□□□□ 0.54
TDP1-205ENST00000553527 SRRM4A7MD48 611 aaKnown RBP18.39■□□□□ 0.53
TDP1-205ENST00000553527 CTSDP07339 412 aaPredicted RBP18.39■□□□□ 0.53
TDP1-205ENST00000553527 RAB9AP51151 201 aa18.39■□□□□ 0.53
TDP1-205ENST00000553527 CCDC71LQ8N9Z2 235 aa18.39■□□□□ 0.53
TDP1-205ENST00000553527 POC5Q8NA72 575 aa18.39■□□□□ 0.53
TDP1-205ENST00000553527 SCGB3A2Q96PL1 93 aa18.39■□□□□ 0.53
TDP1-205ENST00000553527 GNB4Q9HAV0 340 aa18.39■□□□□ 0.53
TDP1-205ENST00000553527 FOXA2Q9Y261 457 aaPredicted RBP18.39■□□□□ 0.53
TDP1-205ENST00000553527 SOX15O60248 233 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 UPK1BO75841 260 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 PIGPP57054 158 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 RND3P61587 244 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 TMEM177Q53S58 311 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 TBC1D26Q86UD7 250 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 SPAG16Q8N0X2 631 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 ZNF491Q8N8L2 437 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 ARPC1AQ92747 370 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 MS4A10Q96PG2 267 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 COPZ2Q9P299 210 aa18.38■□□□□ 0.53
TDP1-205ENST00000553527 ARPC1BO15143 372 aaKnown RBP18.37■□□□□ 0.53
TDP1-205ENST00000553527 KIAA0141Q14154 515 aaPredicted RBP18.37■□□□□ 0.53
TDP1-205ENST00000553527 C4orf3Q8WVX3 66 aa18.37■□□□□ 0.53
TDP1-205ENST00000553527 UBE2E2Q96LR5 201 aa18.37■□□□□ 0.53
TDP1-205ENST00000553527 VSIG4Q9Y279 399 aa18.37■□□□□ 0.53
TDP1-205ENST00000553527 LYRM1O43325 122 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 DUS4LO95620 317 aaKnown RBP18.36■□□□□ 0.53
TDP1-205ENST00000553527 CRYGBP07316 175 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 HOXD3P31249 432 aaPredicted RBP18.36■□□□□ 0.53
TDP1-205ENST00000553527 CRIP2P52943 208 aaPredicted RBP18.36■□□□□ 0.53
TDP1-205ENST00000553527 AKIRIN2Q53H80 203 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 C19orf54Q5BKX5 351 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 OR11H1Q8NG94 326 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 OSR1Q8TAX0 266 aaPredicted RBP18.36■□□□□ 0.53
TDP1-205ENST00000553527 CD300LFQ8TDQ1 290 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 TSC22D3Q99576 134 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 SLC25A21Q9BQT8 299 aaPredicted RBP18.36■□□□□ 0.53
TDP1-205ENST00000553527 C5orf66Q9H5L9 145 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 GPR132Q9UNW8 380 aa18.36■□□□□ 0.53
TDP1-205ENST00000553527 MPPED1O15442 326 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 PLA2G10O15496 165 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 RBFOX2O43251 390 aaKnown RBP eCLIP18.35■□□□□ 0.53
TDP1-205ENST00000553527 RAMP3O60896 148 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 F2RP25116 425 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 CCR6P51684 374 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 RBMS2Q15434 407 aaKnown RBP18.35■□□□□ 0.53
TDP1-205ENST00000553527 VMA21Q3ZAQ7 101 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 TCTEX1D1Q8N7M0 179 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 OR5T1Q8NG75 326 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 MYOZ3Q8TDC0 251 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 ZNF355PQ9NSJ1 428 aa18.35■□□□□ 0.53
TDP1-205ENST00000553527 AURKAIP1Q9NWT8 199 aaPredicted RBP18.35■□□□□ 0.53
TDP1-205ENST00000553527 BTCP35070 178 aa18.34■□□□□ 0.53
TDP1-205ENST00000553527 BRWD1-AS2P59051 145 aa18.34■□□□□ 0.53
TDP1-205ENST00000553527 RTBDNQ9BSG5 229 aaPredicted RBP18.34■□□□□ 0.53
TDP1-205ENST00000553527 ALX4Q9H161 411 aaPredicted RBP18.34■□□□□ 0.53
TDP1-205ENST00000553527 TNCP24821 2201 aa18.34■□□□□ 0.53
TDP1-205ENST00000553527 TGP01266 2768 aa18.33■□□□□ 0.53
TDP1-205ENST00000553527 APELAP0DMC3 54 aa18.33■□□□□ 0.52
TDP1-205ENST00000553527 SSBP2P81877 361 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms