RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SMIM7Q9BQ49 75 aa10.68□□□□□ -0.7
SHMT2-205ENST00000553474 A0A1W2PPE3 182 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF729A6NN14 1252 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 A8MXE2 369 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 TFF1P04155 84 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 OR9G9P0C7N8 305 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 HOXA5P20719 270 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 OPRK1P41145 380 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 ATP5IP56385 69 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 SSTP61278 116 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 POU2AF1Q16633 256 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 STUMQ69YW2 141 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 FAM180AQ6UWF9 173 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 ZNRF1Q8ND25 227 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 OR10A7Q8NGE5 316 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 CORO2AQ92828 525 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 RAB24Q969Q5 203 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 DCTN5Q9BTE1 182 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 SLC25A22Q9H936 323 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 DSCAMO60469 2012 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 PRSS47A8MTI9 375 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 FNDC10F2Z333 226 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 PDE6DO43924 150 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 VDAC2P45880 294 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 TNFAIP6P98066 277 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 HOXA4Q00056 320 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 RELBQ01201 579 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 PRR30Q53SZ7 412 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 CISD2Q8N5K1 135 aaKnown RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 Q8NA96 180 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 FAM210BQ96KR6 192 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 HEYLQ9NQ87 328 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-205ENST00000553474 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
SHMT2-205ENST00000553474 COL6A6A6NMZ7 2263 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-205ENST00000553474 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-205ENST00000553474 PCP4L1A6NKN8 68 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 C15orf61A6NNL5 157 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 SPRY3O43610 288 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 HRASP01112 189 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 IFNA10P01566 189 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 CXCL1P09341 107 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 CDX1P47902 265 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-205ENST00000553474 TFF3Q07654 80 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 C17orf58Q2M2W7 97 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 TEX36Q5VZQ5 186 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 TMEM108Q6UXF1 575 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 ANAPC16Q96DE5 110 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
SHMT2-205ENST00000553474 FOXA2Q9Y261 457 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-205ENST00000553474 SPENQ96T58 3664 aaKnown RBP10.66□□□□□ -0.7
SHMT2-205ENST00000553474 CADP27708 2225 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 PRSS46E5RG02 174 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 IRF2P14316 349 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 TNFRSF1AP19438 455 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 CD40P25942 277 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF134P52741 427 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 LTC4SQ16873 150 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 BSXQ3C1V8 233 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF343Q6P1L6 599 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 ZNF788Q6ZQV5 615 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 Q8N7P7 452 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 NEIL1Q96FI4 390 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-205ENST00000553474 URGCP-MRPS24S4R325 110 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 BSNQ9UPA5 3926 aa10.65□□□□□ -0.7
SHMT2-205ENST00000553474 IGHV3OR15-7A0A075B7D8 119 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 A0A1W2PPV4 95 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 IGHV1-46P01743 117 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 S100PP25815 95 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 RPL39P5Q59GN2 51 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 TREML4Q6UXN2 200 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 TGIF2LYQ8IUE0 185 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 ZNF439Q8NDP4 499 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 BTF3L4Q96K17 158 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 RHOVQ96L33 236 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 TMEM14BQ9NUH8 114 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 IDI2-AS1Q9NZ38 188 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.71
SHMT2-205ENST00000553474 ZGRF1Q86YA3 2104 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 TGIF2-C20orf24A0A0A6YYL0 155 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 F6UZH7 168 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-205ENST00000553474 LINC00205P59089 165 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
SHMT2-205ENST00000553474 VHLLQ6RSH7 139 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 OR4F5Q8NH21 305 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 GAFA1Q96PS6 74 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 OR4F4Q96R69 305 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 PYGO2Q9BRQ0 406 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 PARLQ9H300 379 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 DOK5Q9P104 306 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
SHMT2-205ENST00000553474 TCF19Q9Y242 345 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms