RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 IGHV1-69P01742 117 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 RPL12P30050 165 aaKnown RBP14.15□□□□□ -0.14
PSEN1-206ENST00000553447 LGALS7P47929 136 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 TMEM249Q2WGJ8 235 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 ZNF429Q86V71 674 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 AJUBAQ96IF1 538 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 RITA1Q96K30 269 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 RAB40CQ96S21 281 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 ARL6Q9H0F7 186 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 FOXA2Q9Y261 457 aaPredicted RBP14.15□□□□□ -0.14
PSEN1-206ENST00000553447 GCN1Q92616 2671 aaKnown RBP14.15□□□□□ -0.14
PSEN1-206ENST00000553447 ABCA12Q86UK0 2595 aa14.15□□□□□ -0.14
PSEN1-206ENST00000553447 APCP25054 2843 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 TRAV40A0A0B4J280 105 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 J3QLI3 93 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 GPR137BO60478 399 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 KBTBD11O94819 623 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 TMEM50AO95807 157 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PAX6P26367 422 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PAX9P55771 341 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 UBE2KP61086 200 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 VMA21Q3ZAQ7 101 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PIP4P2Q8N4L2 257 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 WFDC11Q8NEX6 87 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 OR52E5Q8NH55 327 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 OR4A5Q8NH83 315 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 VSTM2AQ8TAG5 236 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 TMEM167AQ8TBQ9 72 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 RNF5Q99942 180 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 CACFD1Q9UGQ2 172 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PRNDQ9UKY0 176 aa14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.14□□□□□ -0.15
PSEN1-206ENST00000553447 PRRC2AP48634 2157 aaKnown RBP14.13□□□□□ -0.15
PSEN1-206ENST00000553447 IGHV3OR16-10A0A075B7F0 116 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 TSC22D2O75157 780 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 TGFAP01135 160 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 IAPPP10997 89 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 SPCS3P61009 180 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 RPL23AP62750 156 aaKnown RBP14.13□□□□□ -0.15
PSEN1-206ENST00000553447 PDLIM3Q53GG5 364 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-206ENST00000553447 GPR157Q5UAW9 335 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 RUSC1-AS1Q66K80 236 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 OR2C3Q8N628 320 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 SMIM8Q96KF7 97 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 TSNAXQ99598 290 aaKnown RBP14.13□□□□□ -0.15
PSEN1-206ENST00000553447 ZC4H2Q9NQZ6 224 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 LYRM2Q9NU23 88 aaPredicted RBP14.13□□□□□ -0.15
PSEN1-206ENST00000553447 TMEM14BQ9NUH8 114 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 WSB1Q9Y6I7 421 aa14.13□□□□□ -0.15
PSEN1-206ENST00000553447 KANTRA0A1W2PQU2 76 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 FAM24AA6NFZ4 105 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 BCL2L11O43521 198 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 IFNA17P01571 189 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 IGKV1D-33P01593 117 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 IGKV1-33P01594 117 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 TAS2R30P59541 319 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 IFITM2Q01629 132 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 PSG5Q15238 335 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 TEX45Q8NA69 505 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 DTD1Q8TEA8 209 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 GON7Q9BXV9 100 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 NUP50Q9UKX7 468 aa14.12□□□□□ -0.15
PSEN1-206ENST00000553447 IGSF23A1L1A6 192 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 CEBPZOSA8MTT3 80 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SLC25A17O43808 307 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 MOSP00540 346 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 AVPP01185 164 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 CRYGBP07316 175 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
PSEN1-206ENST00000553447 IGHV4-38-2P0DP08 117 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 CNTFRP26992 372 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 CAV2P51636 162 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 HSPE1P61604 102 aaKnown RBP14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SPINK9Q5DT21 86 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 NAV2Q8IVL1 2488 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 ZDHHC16Q969W1 377 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 ARPC5LQ9BPX5 153 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SLC25A31Q9H0C2 315 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SLA2Q9H6Q3 261 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 FKBP11Q9NYL4 201 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 PSENENQ9NZ42 101 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 TCF19Q9Y242 345 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 ZNF257Q9Y2Q1 563 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 OR51B2Q9Y5P1 312 aa14.11□□□□□ -0.15
PSEN1-206ENST00000553447 SPDEFO95238 335 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 FGF2P09038 288 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 MYOD1P15172 320 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 RPL8P62917 257 aaKnown RBP14.1□□□□□ -0.15
PSEN1-206ENST00000553447 EWSR1Q01844 656 aaKnown RBP eCLIP14.1□□□□□ -0.15
PSEN1-206ENST00000553447 KLF17Q5JT82 389 aaPredicted RBP14.1□□□□□ -0.15
PSEN1-206ENST00000553447 CYB5R2Q6BCY4 276 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 BRD3OSQ6XYD6 125 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 OR2T10Q8NGZ9 312 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 EAF1Q96JC9 268 aaPredicted RBP14.1□□□□□ -0.15
PSEN1-206ENST00000553447 CIB3Q96Q77 187 aaPredicted RBP14.1□□□□□ -0.15
PSEN1-206ENST00000553447 CENPEQ02224 2701 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 CSMD2Q7Z408 3487 aa14.1□□□□□ -0.15
PSEN1-206ENST00000553447 H3BP45 60 aa14.09□□□□□ -0.15
PSEN1-206ENST00000553447 LY86O95711 162 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms