RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 REG1AP05451 166 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF735P0CB33 412 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 MYOD1P15172 320 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 GNB3P16520 340 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 CTRB1P17538 263 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 PSMB6P28072 239 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 GPR183P32249 361 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 RPL30P62888 115 aaKnown RBP6.71□□□□□ -1.34
SYNE2-209ENST00000553308 C2orf76Q3KRA6 126 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 CTRB2Q6GPI1 263 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 TMEM91Q6ZNR0 172 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 C10orf67Q8IYJ2 551 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 SLC38A6Q8IZM9 456 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 DHRSXQ8N5I4 330 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 STPG3Q8N7X2 389 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 MARC2Q969Z3 335 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 FAM3DQ96BQ1 224 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 RAB3CQ96E17 227 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 SPAG8Q99932 426 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-209ENST00000553308 MND1Q9BWT6 205 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 OR51E2Q9H255 320 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 SLC2A9Q9NRM0 540 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 PLCXD1Q9NUJ7 323 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 LSM2Q9Y333 95 aaKnown RBP6.71□□□□□ -1.34
SYNE2-209ENST00000553308 IGLV11-55A0A075B6I3 123 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 A0A075B6Q4 140 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KIR2DL5BA0A0G2JN68 375 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KIR2DL5BA0A0G2JPC4 375 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 MFNGO00587 321 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 CLEC3BP05452 202 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 CRYGCP07315 174 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 RPS25P62851 125 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 ARFRP1Q13795 201 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 SPHARQ15513 63 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KLK9Q2XQG4 91 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 HES5Q5TA89 166 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 LIPKQ5VXJ0 399 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 C8orf59Q8N0T1 100 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 PUSL1Q8N0Z8 303 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KIR2DL5AQ8N109 375 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF645Q8N7E2 425 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KIR2DL5BQ8NHK3 375 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 TMEM167AQ8TBQ9 72 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 OR2A7Q96R45 310 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 C5orf66Q9H5L9 145 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 MRPL27Q9P0M9 148 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 FBXL17Q9UF56 701 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 KLK9Q9UKQ9 250 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 MRPS7Q9Y2R9 242 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 RBMX2Q9Y388 322 aaKnown RBP6.7□□□□□ -1.34
SYNE2-209ENST00000553308 PRELID3BQ9Y3B1 194 aa6.7□□□□□ -1.34
SYNE2-209ENST00000553308 TRBV7-1A0A0A6YYK4 115 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 CGB1A6NKQ9 187 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 RAB27BO00194 218 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 TSPAN4O14817 238 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 DHFRP00374 187 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 IGLV2-14P01704 120 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 DEFA4P12838 97 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 HIST1H1BP16401 226 aaKnown RBP6.69□□□□□ -1.34
SYNE2-209ENST00000553308 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
SYNE2-209ENST00000553308 GALP22466 123 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 NFYAP23511 347 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-209ENST00000553308 CRHBPP24387 322 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 MAS1LP35410 378 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 PSMD7P51665 324 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 BRWD1-AS2P59051 145 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 MED22Q15528 200 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 SSX9Q7RTT3 188 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 OR10R2Q8NGX6 335 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 OR5B3Q8NH48 314 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 OR4S2Q8NH73 311 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 VSTM2AQ8TAG5 236 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF502Q8TBZ5 544 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 TCTEX1D2Q8WW35 142 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 TMEM190Q8WZ59 177 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 UFD1Q92890 307 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 MAP6D1Q9H9H5 199 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 ELF5Q9UKW6 265 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-209ENST00000553308 RAB22AQ9UL26 194 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 UFC1Q9Y3C8 167 aa6.69□□□□□ -1.34
SYNE2-209ENST00000553308 KIAA1109Q2LD37 5005 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 IGKV1D-13A0A0B4J2D9 117 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 ARL6IP5O75915 188 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 IGKV1-13P0DP09 117 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 RPA2P15927 270 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 CD36P16671 472 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 GADD45AP24522 165 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 CALRP27797 417 aaKnown RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 ELLP55199 621 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 RPL8P62917 257 aaKnown RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 EIF4EBP1Q13541 118 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 RBMS2Q15434 407 aaKnown RBP6.68□□□□□ -1.34
SYNE2-209ENST00000553308 ZNF124Q15973 351 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 PLET1Q6UQ28 207 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 Q6ZS49 121 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 APRG1Q8IVJ8 170 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 C11orf45Q8TAV5 145 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 GALNT14Q96FL9 552 aa6.68□□□□□ -1.34
SYNE2-209ENST00000553308 CXorf58Q96LI9 332 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms