RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 C10orf35Q96D05 121 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ORAI1Q96D31 301 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 LGALS12Q96DT0 336 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 FAM210BQ96KR6 192 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 BCL7BQ9BQE9 202 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 OR51V1Q9H2C8 321 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 FGF20Q9NP95 211 aaPredicted RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 IL36RNQ9UBH0 155 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 GNG12Q9UBI6 72 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 EXOSC1Q9Y3B2 195 aaKnown RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM14AQ9Y6G1 99 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 IGKV1-27A0A075B6S5 117 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TRAV24A0A0B4J272 114 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 DAPL1A0PJW8 107 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 KRTAP29-1A8MX34 341 aaPredicted RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 H3BMQ9 156 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 SLC22A1O15245 554 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TGOLN2O43493 480 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 PRAF2O60831 178 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 GGCTO75223 188 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 RBBP9O75884 186 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 KDM4BO94953 1096 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 GABARAPO95166 117 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 HSMCR30P0CW71 290 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 CLUP10909 449 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 CD36P16671 472 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 SLC2A5P22732 501 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 BDKRB2P30411 391 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 CNN1P51911 297 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 WNT4P56705 351 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 PAX5Q02548 391 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MLLT11Q13015 90 aaPredicted RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM187Q14656 261 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 FXYD3Q14802 87 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 SPHARQ15513 63 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM30BQ3MIR4 351 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 ATAD3CQ5T2N8 411 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 BCL2L15Q5TBC7 163 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 LIPKQ5VXJ0 399 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 BTNL8Q6UX41 500 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 FAM131AQ6UXB0 335 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TMPRSS11AQ6ZMR5 421 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 Q6ZSR3 168 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 Q75L30 129 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 C5orf24Q7Z6I8 188 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 GPHB5Q86YW7 130 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 SAXO1Q8IYX7 474 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TMEM61Q8N0U2 210 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 C6orf223Q8N319 242 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 ACBD7Q8N6N7 88 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 NANOGP1Q8N7R0 232 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 PP6455Q8WZ26 134 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 GHSRQ92847 366 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MARC2Q969Z3 335 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 YIPF6Q96EC8 236 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MRPL48Q96GC5 212 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 CLCC1Q96S66 551 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 CNN2Q99439 309 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 TSC22D3Q99576 134 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MGLLQ99685 303 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 FAM103A1Q9BTL3 118 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 FUNDC2Q9BWH2 189 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 YIPF3Q9GZM5 350 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 FBXL15Q9H469 300 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MOB1AQ9H8S9 216 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 MED20Q9H944 212 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 Q9N2K0 584 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 EXOGQ9Y2C4 368 aaKnown RBP3.75□□□□□ -1.81
CKAP4-203ENST00000553039 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
CKAP4-203ENST00000553039 DSCAML1Q8TD84 2053 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 A0A087X0K7 114 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 A0A1B0GTI1 187 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 CCDC182A6NF36 153 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 J3QRE1 110 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 DEFB4AO15263 64 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 SYT7O43581 403 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 AMBPP02760 352 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 TTRP02766 147 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 MRPL3P09001 348 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 LIMS3P0CW19 117 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 LIMS4P0CW20 117 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 PSMA1P25786 263 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 SSTR5P35346 364 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 OR3A3P47888 321 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 ETV1P50549 477 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 TAS2R43P59537 309 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 SEC61BP60468 96 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 NDPQ00604 133 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 MAJINQ3KP22 176 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 CT45A1Q5HYN5 189 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 GLT8D1Q68CQ7 371 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 OR10H4Q8NGA5 316 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 OR52N1Q8NH53 320 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 CT45A3Q8NHU0 189 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 UFD1Q92890 307 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 MRPS24Q96EL2 167 aaKnown RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 SPAG8Q99932 426 aaPredicted RBP3.74□□□□□ -1.81
CKAP4-203ENST00000553039 NICN1Q9BSH3 213 aa3.74□□□□□ -1.81
CKAP4-203ENST00000553039 DCUN1D5Q9BTE7 237 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms