RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 PTHLHP12272 177 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 FOLR2P14207 255 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 AREGP15514 252 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 CD36P16671 472 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 KIR2DS2P43631 304 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 RPL27AP46776 148 aaKnown RBP8.65□□□□□ -1.02
NEK3-204ENST00000552973 BRWD1-AS2P59051 145 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 GNG2P59768 71 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 ARL6IP1Q15041 203 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 CNIH2Q6PI25 160 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 CLEC19AQ6UXS0 136 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 KCTD12Q96CX2 325 aaKnown RBP8.65□□□□□ -1.02
NEK3-204ENST00000552973 OR2A7Q96R45 310 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 SRD5A3Q9H8P0 318 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 DAPK2Q9UIK4 370 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 MRPS7Q9Y2R9 242 aaKnown RBP8.65□□□□□ -1.02
NEK3-204ENST00000552973 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.03
NEK3-204ENST00000552973 A0A1B0GW64 132 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 ZNF320A2RRD8 509 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 NOTOA8MTQ0 251 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 SSX5O60225 188 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 KBTBD11O94819 623 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 REG1AP05451 166 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 FCER2P06734 321 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 SLC25A42Q86VD7 318 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 PUSL1Q8N0Z8 303 aaKnown RBP8.64□□□□□ -1.03
NEK3-204ENST00000552973 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 FANCD2OSQ96PS1 177 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 DCSTAMPQ9H295 470 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 CCL28Q9NRJ3 127 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 TXNL4BQ9NX01 149 aaKnown RBP8.64□□□□□ -1.03
NEK3-204ENST00000552973 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 BLOC1S6Q9UL45 172 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 ZNF257Q9Y2Q1 563 aa8.64□□□□□ -1.03
NEK3-204ENST00000552973 RRP15Q9Y3B9 282 aaKnown RBP8.64□□□□□ -1.03
NEK3-204ENST00000552973 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 ERICH4A6NGS2 130 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 NPIPB5A8MRT5 1133 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 SLC22A5O76082 557 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 CBLN1P23435 193 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 PSMB9P28065 219 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 PSMB6P28072 239 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 ARL3P36405 182 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 EIF4EBP1Q13541 118 aaPredicted RBP8.63□□□□□ -1.03
NEK3-204ENST00000552973 LAX1Q8IWV1 398 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 VSTM2AQ8TAG5 236 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 LGALS14Q8TCE9 139 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 HSD17B10Q99714 261 aaKnown RBP8.63□□□□□ -1.03
NEK3-204ENST00000552973 VCX3BQ9H321 246 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 SLC2A9Q9NRM0 540 aa8.63□□□□□ -1.03
NEK3-204ENST00000552973 SCAF4O95104 1147 aaKnown RBP8.62□□□□□ -1.03
NEK3-204ENST00000552973 CRYGCP07315 174 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 CLEC2LP0C7M8 214 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 ZNF735P0CB33 412 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 DEFA4P12838 97 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 FCGR2CP31995 323 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 MXD1Q05195 221 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 ZNF66Q6ZN08 573 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 GPHB5Q86YW7 130 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 SPARTQ8N0X7 666 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 GVQW1Q8N7I0 195 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 UXS1Q8NBZ7 420 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 OR5H6Q8NGV6 325 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 SECTM1Q8WVN6 248 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 EEF1AKMT3Q96AZ1 226 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
NEK3-204ENST00000552973 MLXQ9UH92 298 aa8.62□□□□□ -1.03
NEK3-204ENST00000552973 DNAH7Q8WXX0 4024 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 TRAV18A0A075B6X5 111 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 TRAV3A0A0B4J244 114 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 IGHV3-35A0A0C4DH35 117 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 MFSD2BA6NFX1 497 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 LGALS9O00182 355 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 JTBO76095 146 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 HRASP01112 189 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 CLEC3BP05452 202 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 CTRB1P17538 263 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 HLA-GP17693 338 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 GALP22466 123 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 FGF9P31371 208 aaPredicted RBP8.61□□□□□ -1.03
NEK3-204ENST00000552973 MAS1LP35410 378 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 HSPA13P48723 471 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 ARPC4P59998 168 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 RPL8P62917 257 aaKnown RBP8.61□□□□□ -1.03
NEK3-204ENST00000552973 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 UBE2UQ5VVX9 321 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 ZNF57Q68EA5 555 aaPredicted RBP8.61□□□□□ -1.03
NEK3-204ENST00000552973 CTRB2Q6GPI1 263 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 SFXN4Q6P4A7 337 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 SPAG16Q8N0X2 631 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 OR52B4Q8NGK2 314 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 RNF167Q9H6Y7 350 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms