RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TMEM210A6NLX4 147 aa9.71□□□□□ -0.86
PPFIA2-227ENST00000552948 VAMP3Q15836 100 aa9.71□□□□□ -0.86
PPFIA2-227ENST00000552948 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
PPFIA2-227ENST00000552948 LOXL2Q9Y4K0 774 aa9.71□□□□□ -0.86
PPFIA2-227ENST00000552948 LRP4O75096 1905 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 CADP27708 2225 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 OOEPA6NGQ2 149 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 RRHO14718 337 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 CELA3BP08861 270 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 OR5G3P0C626 314 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 TIMP3P35625 211 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 CAMPP49913 170 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 DUSP3P51452 185 aaPredicted RBP9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 COLCA1Q6ZS62 124 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 PKIBQ9C010 78 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 RAB29O14966 203 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 CGAP01215 116 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 TYMSP04818 313 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 ACSF3Q4G176 576 aaPredicted RBP9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 Q56UQ5 140 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 RNASE7Q9H1E1 156 aaKnown RBP9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 SFTPCP11686 197 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 OR1C1Q15619 314 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 SPATA31B1PQ5VZV4 182 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 SAP25Q8TEE9 199 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 LEAP2Q969E1 77 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 FAM173AQ9BQD7 235 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
PPFIA2-227ENST00000552948 ZNF318Q5VUA4 2279 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 CFAP54Q96N23 3096 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 MED12LQ86YW9 2145 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 FRMD6-AS1P0C7T7 363 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 GCHFRP30047 84 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 PDLIM4P50479 330 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 FOXL1Q12952 345 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 HES3Q5TGS1 186 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 Q6P435 159 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 VHLLQ6RSH7 139 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 NRN1Q9NPD7 142 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 GNG10P50151 68 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 RPL15P61313 204 aaKnown RBP9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 OR2M7Q8NG81 312 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 SIT1Q9Y3P8 196 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 OR9G9P0C7N8 305 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 ZBTB34Q8NCN2 500 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 GNB4Q9HAV0 340 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 WDR83OSQ9Y284 106 aa9.69□□□□□ -0.86
PPFIA2-227ENST00000552948 LINC00473A8K010 186 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 AGFG2O95081 481 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 IGLV2-14P01704 120 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 CENPWQ5EE01 88 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 C6orf15Q6UXA7 325 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 PPP1R32Q7Z5V6 425 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 STRADBQ9C0K7 418 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 SH2D2AQ9NP31 389 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 CACNA1GO43497 2377 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 LOC102724200A0A096LPH7 203 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 CBY3A6NI87 242 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 GATA2P23769 480 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 TRA2AQ13595 282 aaKnown RBP eCLIP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 Q8NFD4 153 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 OR13A1Q8NGR1 328 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 SLC35E1Q96K37 410 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 SEPSECSQ9HD40 501 aaKnown RBP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 TRBV20OR9-2A0A075B6H5 130 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 KIR2DL5BA0A0G2JN68 375 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 KIR2DL5BA0A0G2JPC4 375 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 FOXH1O75593 365 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 CA1P00915 261 aaPredicted RBP9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 COL8A2P25067 703 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 RPL39P5Q59GN2 51 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 ASPHD1Q5U4P2 390 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 Q6ZVH6 145 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 KIR2DL5AQ8N109 375 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 OR4C5Q8NGB2 326 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 CT55Q8WUE5 264 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 FAM122AQ96E09 287 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 UQCR10Q9UDW1 63 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
PPFIA2-227ENST00000552948 C15orf62A8K5M9 175 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 CD99P14209 185 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 USF1P22415 310 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 SP5Q6BEB4 398 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 TEPPQ6URK8 271 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 RNF2Q99496 336 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 CELSR3Q9NYQ7 3312 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 Q0VFX4 171 aa9.67□□□□□ -0.86
PPFIA2-227ENST00000552948 STUMQ69YW2 141 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms