RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ZFP57Q9NU63 452 aa9.17□□□□□ -0.94
TRAFD1-209ENST00000552896 SLC2A8Q9NY64 477 aa9.17□□□□□ -0.94
TRAFD1-209ENST00000552896 NUBP2Q9Y5Y2 271 aa9.17□□□□□ -0.94
TRAFD1-209ENST00000552896 WSB1Q9Y6I7 421 aa9.17□□□□□ -0.94
TRAFD1-209ENST00000552896 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
TRAFD1-209ENST00000552896 A0A1W2PN81 502 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 OR2A4O95047 310 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 S1PR2O95136 353 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 CNIH1O95406 144 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 RPLP1P05386 114 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 PF4V1P10720 104 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 PGAM2P15259 253 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 NQO2P16083 231 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 CHRNA7P36544 502 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 AP3S2P59780 193 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 TNXAQ16473 311 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 SCGB2B2Q4G0G5 96 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 FAAP20Q6NZ36 180 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 UNQ5815/PRO19632Q6UWF5 114 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 VKORC1L1Q8N0U8 176 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 OR5M8Q8NGP6 311 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 OR4A5Q8NH83 315 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 DEDD2Q8WXF8 326 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 R3HDM4Q96D70 268 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 OR2A7Q96R45 310 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 THAP7Q9BT49 309 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 FAM103A1Q9BTL3 118 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 BET1LQ9NYM9 111 aa9.16□□□□□ -0.94
TRAFD1-209ENST00000552896 H3BUA1 57 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 ACTL6BO94805 426 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 MAS1LP35410 378 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 FAUP35544 74 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 ERVK-16P61578 105 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 OR4A47Q6IF82 309 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 TMEM65Q6PI78 240 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 TBC1D26Q86UD7 250 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 KLHL30-AS1Q8NEE0 82 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 LFNGQ8NES3 379 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 OR13C8Q8NGS7 320 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 FAM110DQ8TAY7 271 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 ZFAND1Q8TCF1 268 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 SRSF12Q8WXF0 261 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 MRGPRFQ96AM1 343 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 TMEM68Q96MH6 324 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 SRRQ9GZT4 340 aa9.15□□□□□ -0.94
TRAFD1-209ENST00000552896 MARCH11A6NNE9 402 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 NUDT19A8MXV4 375 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 H0Y980 276 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 SOX15O60248 233 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 CTSDP07339 412 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 CDX1P47902 265 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 PIGPP57054 158 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 RPL8P62917 257 aaKnown RBP9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF585BQ52M93 769 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 LCNL1Q6ZST4 164 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 SSX9Q7RTT3 188 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF695Q8IW36 515 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 CADM3Q8N126 398 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 TOMM5Q8N4H5 51 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 CCDC71LQ8N9Z2 235 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 DMBX1Q8NFW5 382 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 OR51S1Q8NGJ8 323 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 MARCH1Q8TCQ1 289 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 C4orf3Q8WVX3 66 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 PHB2Q99623 299 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 SPIN2AQ99865 258 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 SPIN2BQ9BPZ2 258 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 SLA2Q9H6Q3 261 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 TMEM140Q9NV12 185 aa9.14□□□□□ -0.95
TRAFD1-209ENST00000552896 NOTCH3Q9UM47 2321 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 A6NHS1 94 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 MPPED1O15442 326 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 B3GALNT1O75752 331 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 BRI3O95415 125 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 PF4P02776 101 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 IL6RP08887 468 aaPredicted RBP9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 RPA2P15927 270 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 HLA-GP17693 338 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 PI3P19957 117 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 LPAR6P43657 344 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 ASPHD1Q5U4P2 390 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 ETV3LQ6ZN32 361 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 GDPD1Q8N9F7 314 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 UBE2E2Q96LR5 201 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 KLK15Q9H2R5 256 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 HRASLSQ9HDD0 168 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 MCUBQ9NWR8 336 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 COPZ2Q9P299 210 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 SCP2D1Q9UJQ7 156 aa9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-209ENST00000552896 SERPINE2P07093 398 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 CD40LGP29965 261 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 RAB9AP51151 201 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 RUNX1Q01196 453 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms