RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 VKORC1L1Q8N0U8 176 aa12.5□□□□□ -0.41
CACNB3-222ENST00000552465 FAM3DQ96BQ1 224 aa12.5□□□□□ -0.41
CACNB3-222ENST00000552465 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-222ENST00000552465 C5orf66Q9H5L9 145 aa12.5□□□□□ -0.41
CACNB3-222ENST00000552465 FKBP14Q9NWM8 211 aa12.5□□□□□ -0.41
CACNB3-222ENST00000552465 DENRO43583 198 aaKnown RBP12.49□□□□□ -0.41
CACNB3-222ENST00000552465 DHFRP00374 187 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 ZNF735P0CB33 412 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 AREGP15514 252 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
CACNB3-222ENST00000552465 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 BPIFB6Q8NFQ5 453 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 OR2A7Q96R45 310 aa12.49□□□□□ -0.41
CACNB3-222ENST00000552465 TRBV7-1A0A0A6YYK4 115 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 CTRB1P17538 263 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 MAS1LP35410 378 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 ELLP55199 621 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-222ENST00000552465 PLA2G7Q13093 441 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 ARFRP1Q13795 201 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 CTRB2Q6GPI1 263 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 FBLIM1Q8WUP2 373 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 RAB22AQ9UL26 194 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 UFC1Q9Y3C8 167 aa12.48□□□□□ -0.41
CACNB3-222ENST00000552465 TMEM272A0A1B0GTI8 110 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 MFSD2BA6NFX1 497 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 J3QRK9 145 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 TSPAN4O14817 238 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 KBTBD11O94819 623 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 GNAO1P09471 354 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
CACNB3-222ENST00000552465 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
CACNB3-222ENST00000552465 SPHARQ15513 63 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 TMEM91Q6ZNR0 172 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 KCTD9Q7L273 389 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
CACNB3-222ENST00000552465 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 VSTM2AQ8TAG5 236 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 CENPOQ9BU64 300 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
CACNB3-222ENST00000552465 MRPS7Q9Y2R9 242 aaKnown RBP12.47□□□□□ -0.41
CACNB3-222ENST00000552465 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
CACNB3-222ENST00000552465 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 DEFA4P12838 97 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 MYOD1P15172 320 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 GNB3P16520 340 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 FCGR2BP31994 310 aaPredicted RBP12.46□□□□□ -0.41
CACNB3-222ENST00000552465 PSMD7P51665 324 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.41
CACNB3-222ENST00000552465 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 Q6ZS49 121 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 C8orf59Q8N0T1 100 aaPredicted RBP12.46□□□□□ -0.41
CACNB3-222ENST00000552465 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 GALNT14Q96FL9 552 aa12.46□□□□□ -0.41
CACNB3-222ENST00000552465 RBMX2Q9Y388 322 aaKnown RBP12.46□□□□□ -0.41
CACNB3-222ENST00000552465 MFNGO00587 321 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 S1PR2O95136 353 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 IFNA4P05014 189 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 REG1AP05451 166 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 GPR183P32249 361 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 RANBP1P43487 201 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 LIPKQ5VXJ0 399 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 PLET1Q6UQ28 207 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 ZNF502Q8TBZ5 544 aa12.45□□□□□ -0.42
CACNB3-222ENST00000552465 ZNF436Q9C0F3 470 aaPredicted RBP12.45□□□□□ -0.42
CACNB3-222ENST00000552465 A0A075B6Q4 140 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 RAB27BO00194 218 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 ARL6IP5O75915 188 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 IGLV2-14P01704 120 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 HLA-DQB1P01920 261 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 CD36P16671 472 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 CRHBPP24387 322 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 BRWD1-AS2P59051 145 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 RBMS2Q15434 407 aaKnown RBP12.44□□□□□ -0.42
CACNB3-222ENST00000552465 MED22Q15528 200 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 SSX1Q16384 188 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 LAMTOR1Q6IAA8 161 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 PACRGLQ8N7B6 248 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 C11orf45Q8TAV5 145 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 MFFQ9GZY8 342 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 C8orf4Q9NR00 106 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 FBXL17Q9UF56 701 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 OR2W1Q9Y3N9 320 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 V9GY05 133 aa12.44□□□□□ -0.42
CACNB3-222ENST00000552465 HECTD4Q9Y4D8 3996 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 CGB1A6NKQ9 187 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 SLC22A5O76082 557 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 HIST1H1DP16402 221 aaKnown RBP12.43□□□□□ -0.42
CACNB3-222ENST00000552465 GADD45AP24522 165 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 TALDO1P37837 337 aa12.43□□□□□ -0.42
CACNB3-222ENST00000552465 TCTAP57738 103 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms