RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 MKRN2OSH3BPM6 223 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 M0QZ92 97 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 M0R381 172 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 DCTN3O75935 186 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 IL6P05231 212 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 RD3LP0DJH9 198 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 GRPRP30550 384 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 IFNGR2P38484 337 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 REG1BP48304 166 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 BLVRAP53004 296 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 TBPL1P62380 186 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 FKBP1AP62942 108 aaKnown RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 HLA-DRB3P79483 266 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 PLPPR5Q32ZL2 321 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 LGALS9BQ3B8N2 356 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 GLT8D1Q68CQ7 371 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 PTRHD1Q6GMV3 140 aaKnown RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 FP248Q71RG6 208 aaPredicted RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 DCXRQ7Z4W1 244 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 NAA40Q86UY6 237 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 GPR32P1Q8NGA4 272 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 OR10D3Q8NH80 312 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 DNAJB3Q8WWF6 145 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 RNASE6Q93091 150 aaKnown RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 TESCQ96BS2 214 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 ROPN1LQ96C74 230 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 SMIM19Q96E16 107 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 SFRP2Q96HF1 295 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 BBS2Q9BXC9 721 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 WDR54Q9H977 334 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 AK3Q9UIJ7 227 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 C3orf18Q9UK00 162 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 PCYT1BQ9Y5K3 369 aaPredicted RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 MYH11P35749 1972 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 FREM1Q5H8C1 2179 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 MALRD1Q5VYJ5 2156 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 INTS1Q8N201 2190 aaKnown RBP0.73□□□□□ -2.29
USP44-207ENST00000552237 RIMS2Q9UQ26 1411 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 ABCC11Q96J66 1382 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 GREB1Q4ZG55 1949 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 EIF4G1Q04637 1599 aaKnown RBP0.72□□□□□ -2.29
USP44-207ENST00000552237 IGHV1-69-2A0A0G2JMI3 117 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 IRGMA1A4Y4 181 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 HMSDA8MTL9 139 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 SMLR1H3BR10 107 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 J3QRK9 145 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 SLC22A1O15245 554 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 ACOX3O15254 700 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 SCN2BO60939 215 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 ADAP1O75689 374 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 KRT75O95678 551 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 TYMSP04818 313 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 CALB1P05937 261 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 IL3P08700 152 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 METTL15P1P0C7V9 234 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 CD79AP11912 226 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 MSNP26038 577 aaKnown RBP0.72□□□□□ -2.29
USP44-207ENST00000552237 MIPP30301 263 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 OMPP47874 163 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 RAB13P51153 203 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 POLR2GP62487 172 aaKnown RBP eCLIP0.72□□□□□ -2.29
USP44-207ENST00000552237 HPCAP84074 193 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 IFITM2Q01629 132 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 COQ5Q5HYK3 327 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 CLVS2Q5SYC1 327 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 HIST2H3PS2Q5TEC6 136 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 LPCAT3Q6P1A2 487 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 LRRN1Q6UXK5 716 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 BOD1L2Q8IYS8 172 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 OR1L8Q8NGR8 309 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 ASB13Q8WXK3 278 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 PPP1R14BQ96C90 147 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 DCUN1D1Q96GG9 259 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 CMSS1Q9BQ75 279 aaKnown RBP0.72□□□□□ -2.29
USP44-207ENST00000552237 GINS4Q9BRT9 223 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 SLC22A4Q9H015 551 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 GPR84Q9NQS5 396 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 RSL24D1Q9UHA3 163 aaKnown RBP0.72□□□□□ -2.29
USP44-207ENST00000552237 KLK5Q9Y337 293 aaPredicted RBP0.72□□□□□ -2.29
USP44-207ENST00000552237 CHD5Q8TDI0 1954 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 C9orf84Q5VXU9 1444 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 PTPRSQ13332 1948 aa0.72□□□□□ -2.29
USP44-207ENST00000552237 TMEM94Q12767 1356 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 REREQ9P2R6 1566 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 EVC2Q86UK5 1308 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 TRAV38-1A0A0B4J264 116 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 A0A0J9YW62 118 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 OR6C6A6NF89 314 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 FABP12A6NFH5 140 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 PSMD12O00232 456 aaPredicted RBP0.71□□□□□ -2.3
USP44-207ENST00000552237 SDCBPO00560 298 aaPredicted RBP0.71□□□□□ -2.3
USP44-207ENST00000552237 ITGB1BP1O14713 200 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 AZIN1O14977 448 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 BIRC5O15392 142 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 CIAO1O76071 339 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 BRI3O95415 125 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ISG15P05161 165 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 ATP5G1P05496 136 aa0.71□□□□□ -2.3
USP44-207ENST00000552237 SERPINA7P05543 415 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms