RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SETD6Q8TBK2 473 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 CD300LFQ8TDQ1 290 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 GPR148Q8TDV2 347 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 ACOT12Q8WYK0 555 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 LGALS12Q96DT0 336 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 CIB1Q99828 191 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 SPAG8Q99932 426 aaPredicted RBP3.91□□□□□ -1.78
HOXB3-213ENST00000552000 CSTL1Q9H114 145 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 CHMP1AQ9HD42 196 aaPredicted RBP3.91□□□□□ -1.78
HOXB3-213ENST00000552000 SCRT2Q9NQ03 307 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF221Q9UK13 617 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 SLC45A2Q9UMX9 530 aa3.91□□□□□ -1.78
HOXB3-213ENST00000552000 TRAV10A0A0B4J240 114 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 IGHV3-35A0A0C4DH35 117 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 GAGE10A6NGK3 116 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 G3V2T6 193 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 ITGB1BP1O14713 200 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 SCTP09683 121 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 C8orf88P0DMB2 117 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 PTTG1IPP53801 180 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
HOXB3-213ENST00000552000 FLOT2Q14254 428 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 VMA21Q3ZAQ7 101 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 PVRIGQ6DKI7 326 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 Q6ZTC4 211 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 APRG1Q8IVJ8 170 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 TTC9CQ8N5M4 171 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 SETD9Q8NE22 299 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 MARC2Q969Z3 335 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 CMTM3Q96MX0 182 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 NEDD4LQ96PU5 975 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 ABHD1Q96SE0 405 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 FAAP24Q9BTP7 215 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 THTPAQ9BU02 230 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 RNF126Q9BV68 326 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 C6orf62Q9GZU0 229 aaPredicted RBP3.9□□□□□ -1.79
HOXB3-213ENST00000552000 IMPAD1Q9NX62 359 aa3.9□□□□□ -1.79
HOXB3-213ENST00000552000 EXOGQ9Y2C4 368 aaKnown RBP3.9□□□□□ -1.79
HOXB3-213ENST00000552000 RRP15Q9Y3B9 282 aaKnown RBP3.9□□□□□ -1.79
HOXB3-213ENST00000552000 TRAV8-7A0A075B6U6 113 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 TCRBV3S1A0A5B6 114 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 OR4C46A6NHA9 309 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 NAPSAO96009 420 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 P0DMU3 169 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 FAM231AP0DMU4 169 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 FAM231CP0DMU5 169 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 IGFBP3P17936 291 aaPredicted RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 SNRPGP62308 76 aaKnown RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 CBX3Q13185 183 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 RBMY1FQ15415 496 aaKnown RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 C2orf76Q3KRA6 126 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 SOHLH1Q5JUK2 328 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 GLT8D1Q68CQ7 371 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 XAF1Q6GPH4 301 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 WDR73Q6P4I2 378 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF880Q6PDB4 577 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 PET117Q6UWS5 81 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 Q6ZR54 194 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 MOB1BQ7L9L4 216 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 C6orf201Q7Z4U5 140 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 CEACAM19Q7Z692 300 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 SLC25A42Q86VD7 318 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 TEX45Q8NA69 505 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 ZBTB8BQ8NAP8 495 aaPredicted RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 PTX4Q96A99 478 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 C5orf30Q96GV9 206 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 SPIN2AQ99865 258 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 SPIN2BQ9BPZ2 258 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 HDHD3Q9BSH5 251 aaPredicted RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 GABARAPL3Q9BY60 117 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 GABARAPL1Q9H0R8 117 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 C5orf66Q9H5L9 145 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF430Q9H8G1 570 aaPredicted RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 AMBNQ9NP70 447 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 MRPL27Q9P0M9 148 aaKnown RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 ZNF257Q9Y2Q1 563 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 ARL2BPQ9Y2Y0 163 aa3.89□□□□□ -1.79
HOXB3-213ENST00000552000 RPL36Q9Y3U8 105 aaKnown RBP3.89□□□□□ -1.79
HOXB3-213ENST00000552000 IGHV4-28A0A0C4DH34 117 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 A0A1W2PPK0 400 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 DPPA5A6NC42 116 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 MFSD2BA6NFX1 497 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 DYNC1I1O14576 645 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 DCTN3O75935 186 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 CRYZL1O95825 349 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 CA1P00915 261 aaPredicted RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 AMBPP02760 352 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 CTSDP07339 412 aaPredicted RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 GSTT2P0CG29 244 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 GSTT2BP0CG30 244 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RBMY1A1P0DJD3 496 aaKnown RBP3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RBMY1CP0DJD4 496 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 MYOD1P15172 320 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 GYPEP15421 78 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 RPA2P15927 270 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 GALP22466 123 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 ZBTB25P24278 435 aa3.88□□□□□ -1.79
HOXB3-213ENST00000552000 MAPK3P27361 379 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms