RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DEFB4AO15263 64 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 FABP7O15540 132 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 ATP8B1O43520 1251 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 MRPS14O60783 128 aaKnown RBP11.16□□□□□ -0.62
CACNB3-220ENST00000551716 S1PR2O95136 353 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 ZNF735P0CB33 412 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 RPL27AP46776 148 aaKnown RBP11.16□□□□□ -0.62
CACNB3-220ENST00000551716 UNC119Q13432 240 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 ZNF575Q86XF7 245 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 FAM89BQ8N5H3 189 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 MAPKAPK5-AS1Q8N8E1 139 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 THYN1Q9P016 225 aa11.16□□□□□ -0.62
CACNB3-220ENST00000551716 DIMT1Q9UNQ2 313 aaKnown RBP11.16□□□□□ -0.62
CACNB3-220ENST00000551716 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 TMEM14DPA8MWL7 114 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 M0R2N4 97 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 BET1O15155 118 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 SOCS1O15524 211 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 CD1AP06126 327 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
CACNB3-220ENST00000551716 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 GPR183P32249 361 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
CACNB3-220ENST00000551716 ARFRP1Q13795 201 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 IRF3Q14653 427 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 C1orf146Q5VVC0 180 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 ZFP41Q8N8Y5 198 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 TMEM190Q8WZ59 177 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 OR2A7Q96R45 310 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
CACNB3-220ENST00000551716 HSPG2P98160 4391 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 LOC100130705A0A1B0GUX0 176 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 K7EMT4 169 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 CA1P00915 261 aaPredicted RBP11.14□□□□□ -0.63
CACNB3-220ENST00000551716 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNB3-220ENST00000551716 PSMD7P51665 324 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 QRFPP83859 136 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 OR6M1Q8NGM8 313 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 PHYHIPQ92561 330 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 LPAR5Q9H1C0 372 aa11.14□□□□□ -0.63
CACNB3-220ENST00000551716 MRPS7Q9Y2R9 242 aaKnown RBP11.14□□□□□ -0.63
CACNB3-220ENST00000551716 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 IGHV3-35A0A0C4DH35 117 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 LINC00473A8K010 186 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 CYB5BO43169 146 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 FCGR3BO75015 233 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 KBTBD11O94819 623 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 CTSDP07339 412 aaPredicted RBP11.13□□□□□ -0.63
CACNB3-220ENST00000551716 CELP19835 753 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 IGSF11Q5DX21 431 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 LIPKQ5VXJ0 399 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 ZNF645Q8N7E2 425 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 TMEM167AQ8TBQ9 72 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 APH1BQ8WW43 257 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 C5orf30Q96GV9 206 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 CLEC2DQ9UHP7 191 aa11.13□□□□□ -0.63
CACNB3-220ENST00000551716 MFSD2BA6NFX1 497 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 C15orf61A6NNL5 157 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 NDUFA4O00483 81 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 TGOLN2O43493 480 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 AMBPP02760 352 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 AREGP15514 252 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 SPSB3Q6PJ21 355 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 CBR4Q8N4T8 237 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 Q8NAQ8 132 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 ZNF485Q8NCK3 441 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 GINS4Q9BRT9 223 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
CACNB3-220ENST00000551716 PNMA8CA0A1B0GUJ8 204 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 E7EUB6 86 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 IFNA10P01566 189 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 CDK1P06493 297 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 CD3GP09693 182 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 CD37P11049 281 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 MIFP14174 115 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 TMEM50BP56557 158 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 SMN1Q16637 294 aaKnown RBP11.11□□□□□ -0.63
CACNB3-220ENST00000551716 TMEM41BQ5BJD5 291 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 Q6ZTC4 211 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 BSCL2Q96G97 398 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-220ENST00000551716 CMTM3Q96MX0 182 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 PECRQ9BY49 303 aa11.11□□□□□ -0.63
CACNB3-220ENST00000551716 SMPD3Q9NY59 655 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-220ENST00000551716 FOXI3A8MTJ6 420 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-220ENST00000551716 WBP4O75554 376 aaKnown RBP11.1□□□□□ -0.63
CACNB3-220ENST00000551716 SLC22A5O76082 557 aa11.1□□□□□ -0.63
CACNB3-220ENST00000551716 IFNA21P01568 189 aa11.1□□□□□ -0.63
CACNB3-220ENST00000551716 IFNA17P01571 189 aa11.1□□□□□ -0.63
CACNB3-220ENST00000551716 RPA2P15927 270 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms