RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RBP7Q96R05 134 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 CAMK2N2Q96S95 79 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF382Q96SR6 550 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 NXF2Q9GZY0 626 aaKnown RBP3.5□□□□□ -1.85
CPSF6-206ENST00000550987 IFT46Q9NQC8 304 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 SLC23A2Q9UGH3 650 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 HHLA2Q9UM44 414 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR51B2Q9Y5P1 312 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 U3KQK5 164 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 MPDZO75970 2070 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 WI2-2373I1.2A0A1W2PRP0 233 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF98A6NK75 572 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 J3QLI3 93 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF593O00488 134 aaPredicted RBP3.49□□□□□ -1.85
CPSF6-206ENST00000550987 MPZL2O60487 215 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 ENTPD6O75354 484 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 MED6O75586 246 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 RP2O75695 350 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 SLC22A5O76082 557 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TTC4O95801 387 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CD74P04233 296 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CD5P06127 495 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CST2P09228 141 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 PSG2P11465 335 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 MYL12AP19105 171 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 UBE2E1P51965 193 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 HCCSP53701 268 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 MTPNP58546 118 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TAS2R31P59538 309 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CDC42P60953 191 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 SLC35A1P78382 337 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CD164Q04900 197 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 HIST3H3Q16695 136 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TBC1D28Q2M2D7 210 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 HIST2H3PS2Q5TEC6 136 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 FBXW9Q5XUX1 488 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 SMARCD3Q6STE5 483 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 C5orf46Q6UWT4 87 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 C3orf62Q6ZUJ4 267 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM144Q7Z5S9 345 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 OR6V1Q8N148 313 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 UMODL1-AS1Q8N2C9 162 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 OR2AE1Q8NHA4 323 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TMBIM1Q969X1 311 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 SMIM12Q96EX1 92 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 UBE2E2Q96LR5 201 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CCL19Q99731 98 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM208Q9BTX3 173 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 KIFC1Q9BW19 673 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 CCDC90BQ9GZT6 254 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 FBXO5Q9UKT4 447 aa3.49□□□□□ -1.85
CPSF6-206ENST00000550987 FAM32AQ9Y421 112 aaKnown RBP3.49□□□□□ -1.85
CPSF6-206ENST00000550987 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
CPSF6-206ENST00000550987 AGRNO00468 2067 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 FAT1Q14517 4588 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 A0A096LNJ9 63 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 IGKV1-8A0A0C4DH67 115 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 METTL15A6NJ78 407 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 RFPL4AA6NLU0 287 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 RFPL4AL1F8VTS6 287 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 F8W036 122 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 MYL12BO14950 172 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 UBDO15205 165 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 FABP7O15540 132 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ENSAO43768 121 aaKnown RBP3.48□□□□□ -1.85
CPSF6-206ENST00000550987 SLC35G6P0C7Q6 338 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 TLX1NBP0CAT3 122 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 IGFBP3P17936 291 aaPredicted RBP3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ALOX5APP20292 161 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 DLX6P56179 175 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 EDDM3AQ14507 147 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 CLEC12BQ2HXU8 276 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 HBMQ6B0K9 141 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 FAM71E1Q6IPT2 247 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ZFP1Q6P2D0 407 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 Q6ZT83 130 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF433Q8N7K0 673 aaPredicted RBP3.48□□□□□ -1.85
CPSF6-206ENST00000550987 CLDN22Q8N7P3 220 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 OR1S1Q8NH92 325 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 LHFPL5Q8TAF8 219 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 RXFP4Q8TDU9 374 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM234Q8WY98 164 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 RDH12Q96NR8 316 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 GPR22Q99680 433 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 SULT4A1Q9BR01 284 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ARV1Q9H2C2 271 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 TXNIPQ9H3M7 391 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 BIN3Q9NQY0 253 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 COMMD9Q9P000 198 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF222Q9UK12 451 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 HSPB11Q9Y547 144 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 DNAJC13O75165 2243 aa3.48□□□□□ -1.85
CPSF6-206ENST00000550987 A0A1B0GVX0 72 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 OR6C6A6NF89 314 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 A8MU10 97 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 PPP5D1E7EU14 171 aa3.47□□□□□ -1.85
CPSF6-206ENST00000550987 DNASE2O00115 360 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-206ENST00000550987 REM1O75628 298 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms