RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MC5RP33032 325 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 UBE2MP61081 183 aaKnown RBP10.51□□□□□ -0.73
NUP188-211ENST00000550219 EBI3Q14213 229 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 RGS21Q2M5E4 152 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 TEX38Q6PEX7 206 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 GLDNQ6ZMI3 551 aaPredicted RBP10.51□□□□□ -0.73
NUP188-211ENST00000550219 KCTD9Q7L273 389 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 TBC1D26Q86UD7 250 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 Q8N6K4 173 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 TCTEX1D1Q8N7M0 179 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 HSPB9Q9BQS6 159 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 FAM212BQ9NTI7 297 aaPredicted RBP10.51□□□□□ -0.73
NUP188-211ENST00000550219 NUDT15Q9NV35 164 aa10.51□□□□□ -0.73
NUP188-211ENST00000550219 CCL24O00175 119 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
NUP188-211ENST00000550219 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.73
NUP188-211ENST00000550219 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 RLN1P04808 185 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 SPNP16150 400 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 VDAC1P21796 283 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 KIR2DS2P43631 304 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 TAS2R31P59538 309 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 CATR1Q13166 79 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 OXA1LQ15070 435 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 TMEM128Q5BJH2 165 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 CENPSQ8N2Z9 138 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 TCTEX1D2Q8WW35 142 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 GON7Q9BXV9 100 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 NAA60Q9H7X0 242 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
NUP188-211ENST00000550219 H0Y980 276 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 APOA2P02652 100 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 RRASP10301 218 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 SUPT4H1P63272 117 aaKnown RBP10.49□□□□□ -0.73
NUP188-211ENST00000550219 MMDQ15546 238 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 ZNF585BQ52M93 769 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 PLET1Q6UQ28 207 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 TMED4Q7Z7H5 227 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 OR51H1Q8NH63 302 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 CD300LFQ8TDQ1 290 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 B9D2Q9BPU9 175 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 SLC35D1Q9NTN3 355 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
NUP188-211ENST00000550219 TRAV6A0A075B6T7 132 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 C3orf85A0A1B0GTC6 90 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 IGKV1-16P04430 117 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 IL5P05113 134 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 AKR1C4P17516 323 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 ANXA7P20073 488 aaKnown RBP10.48□□□□□ -0.73
NUP188-211ENST00000550219 UCP1P25874 307 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 F2RL1P55085 397 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 FOXE3Q13461 319 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 RTL8BQ17RB0 113 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 SGPP2Q8IWX5 399 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 OR5M8Q8NGP6 311 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 PRR25Q96S07 402 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 TP53RKQ96S44 253 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 RNF5Q99942 180 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 PLSCR3Q9NRY6 295 aa10.48□□□□□ -0.73
NUP188-211ENST00000550219 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
NUP188-211ENST00000550219 INMT-MINDY4F8WBC2 141 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 RAMP3O60896 148 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 FCGR3BO75015 233 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 SFT2D2O95562 160 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 ELANEP08246 267 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 OR5AC1P0C628 307 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 OR4E1P0C645 316 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 PPP1R1AQ13522 171 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 TMEM187Q14656 261 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 SPAG16Q8N0X2 631 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 FAM71E2Q8N5Q1 922 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 MINDY2Q8NBR6 621 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 OR8H1Q8NGG4 311 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 OR4S2Q8NH73 311 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 GLYATL2Q8WU03 294 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 TMEM222Q9H0R3 208 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 PARP11Q9NR21 331 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 KCNIP3Q9Y2W7 256 aa10.47□□□□□ -0.73
NUP188-211ENST00000550219 C9orf170A2RU37 121 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 HPRT1P00492 218 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 RPA2P15927 270 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 CFHR3Q02985 330 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 DHRS2Q13268 280 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 SP6Q3SY56 376 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 OR2B11Q5JQS5 317 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 C9orf66Q5T8R8 295 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 LYG2Q86SG7 212 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 CADM3Q8N126 398 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 OSR1Q8TAX0 266 aaPredicted RBP10.46□□□□□ -0.73
NUP188-211ENST00000550219 C4orf3Q8WVX3 66 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 FLYWCH2Q96CP2 140 aaKnown RBP10.46□□□□□ -0.73
NUP188-211ENST00000550219 RITA1Q96K30 269 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 TMEM56Q96MV1 263 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms