RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SLC2A9Q9NRM0 540 aa10.19□□□□□ -0.78
TROAP-211ENST00000549891 RBMX2Q9Y388 322 aaKnown RBP10.19□□□□□ -0.78
TROAP-211ENST00000549891 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
TROAP-211ENST00000549891 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 J3QRK9 145 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 HLA-DQB1P01920 261 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 EDN2P20800 178 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 MYL9P24844 172 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 OR2B11Q5JQS5 317 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 CLEC19AQ6UXS0 136 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 PRSS48Q7RTY5 328 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 VKORC1L1Q8N0U8 176 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 TMEM167AQ8TBQ9 72 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 ST6GALNAC5Q9BVH7 336 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 ATG5Q9H1Y0 275 aa10.18□□□□□ -0.78
TROAP-211ENST00000549891 IGKV1D-8A0A087WSZ0 117 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 TRBV7-1A0A0A6YYK4 115 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 TMEM213A2RRL7 107 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 NUPR2A6NF83 97 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 NDUFB8O95169 186 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 LY6G6CO95867 125 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 HRASP01112 189 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 CRYGCP07315 174 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 ZNF735P0CB33 412 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 DEFA4P12838 97 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 RAB3BP20337 219 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 NFYAP23511 347 aaPredicted RBP10.17□□□□□ -0.78
TROAP-211ENST00000549891 PSMB6P28072 239 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 OR10A3P58181 314 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
TROAP-211ENST00000549891 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
TROAP-211ENST00000549891 UXS1Q8NBZ7 420 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 TCTEX1D2Q8WW35 142 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 CACNG8Q8WXS5 425 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 MARC2Q969Z3 335 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 CXorf58Q96LI9 332 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 FANCD2OSQ96PS1 177 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 AIFM2Q9BRQ8 373 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 DCSTAMPQ9H295 470 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 MLXQ9UH92 298 aa10.17□□□□□ -0.78
TROAP-211ENST00000549891 SCAF4O95104 1147 aaKnown RBP10.16□□□□□ -0.78
TROAP-211ENST00000549891 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
TROAP-211ENST00000549891 IL6RP08887 468 aaPredicted RBP10.16□□□□□ -0.78
TROAP-211ENST00000549891 RPL30P62888 115 aaKnown RBP10.16□□□□□ -0.78
TROAP-211ENST00000549891 CDNFQ49AH0 187 aa10.16□□□□□ -0.78
TROAP-211ENST00000549891 HACD4Q5VWC8 232 aa10.16□□□□□ -0.78
TROAP-211ENST00000549891 CNIH2Q6PI25 160 aa10.16□□□□□ -0.78
TROAP-211ENST00000549891 SPATA2Q9UM82 520 aa10.16□□□□□ -0.78
TROAP-211ENST00000549891 SCGNO76038 276 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 IGLV2-14P01704 120 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 AREGP15514 252 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 CTRB1P17538 263 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 GALP22466 123 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 CRHBPP24387 322 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 APOC4P55056 127 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 RPL8P62917 257 aaKnown RBP10.15□□□□□ -0.78
TROAP-211ENST00000549891 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 TM4SF20Q53R12 229 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 CTRB2Q6GPI1 263 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 BTNL8Q6UX41 500 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 ZNF66Q6ZN08 573 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 ZNF367Q7RTV3 350 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 WFDC3Q8IUB2 231 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 SLC38A6Q8IZM9 456 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 OR4A5Q8NH83 315 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 THYN1Q9P016 225 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
TROAP-211ENST00000549891 KLK9Q9UKQ9 250 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 TP53TG1Q9Y2A0 90 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 S4R3C0 116 aa10.15□□□□□ -0.78
TROAP-211ENST00000549891 E7EUB6 86 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 CLEC3BP05452 202 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 MYOD1P15172 320 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 BMI1P35226 326 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 ELLP55199 621 aaPredicted RBP10.14□□□□□ -0.79
TROAP-211ENST00000549891 TNFRSF9Q07011 255 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 TBCEQ15813 527 aaPredicted RBP10.14□□□□□ -0.79
TROAP-211ENST00000549891 C19orf35Q6ZS72 473 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 Q6ZWC4 215 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 MFSD4AQ8N468 514 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 KRTAP17-1Q9BYP8 105 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 NDUFB11Q9NX14 153 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 TAS2R8Q9NYW2 309 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 ELF5Q9UKW6 265 aaPredicted RBP10.14□□□□□ -0.79
TROAP-211ENST00000549891 UFC1Q9Y3C8 167 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 SELENOKQ9Y6D0 94 aa10.14□□□□□ -0.79
TROAP-211ENST00000549891 IGLV11-55A0A075B6I3 123 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 IGKV1D-13A0A0B4J2D9 117 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 A0A0J9YWU9 116 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 UBE2CO00762 179 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 CYB5BO43169 146 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 C8orf88P0DMB2 117 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 IGKV1-13P0DP09 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms