RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PROCRQ9UNN8 238 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 SETD2Q9BYW2 2564 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 SPRY3O43610 288 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 CTXN2P0C2S0 81 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 TCL1AP56279 114 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 PNRC1Q12796 327 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 SRSF7Q16629 238 aaKnown RBP eCLIP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 RPL39P5Q59GN2 51 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 C1orf185Q5T7R7 199 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 IL22RA2Q969J5 263 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF705FA8MVS1 300 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 B4DEV8 164 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 GYPAP02724 150 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 HOXC12P31275 282 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 CEACAM8P31997 349 aaPredicted RBP9.24□□□□□ -0.93
LINC00661-204ENST00000549354 ATP5G3P48201 142 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 RAB4BP61018 213 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 PSG7Q13046 419 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 Q6ZS49 121 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 H2BFWTQ7Z2G1 175 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 OR8G5Q8NG78 346 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 FAM57AQ8TBR7 257 aa9.24□□□□□ -0.93
LINC00661-204ENST00000549354 IQCF6A8MYZ5 107 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 SLC31A2O15432 143 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 NDUFB4O95168 129 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 C1QTNF9P0C862 333 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 SLC25A6P12236 298 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TBR1Q16650 682 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 C3orf36Q3SXR2 165 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 Q6ZR03 302 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 LINC00596Q86U02 117 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 FAM103A1Q9BTL3 118 aaKnown RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 DCHS2Q6V1P9 2916 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 HCFC1P51610 2035 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TRAV3A0A0B4J244 114 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 A0A1B0GWJ7 208 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 C12orf77C9JDV5 145 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 NUPR1O60356 82 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 HBZP02008 142 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TDGF1P3P51864 188 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 RND2P52198 227 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 SP5Q6BEB4 398 aaPredicted RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 C1orf174Q8IYL3 243 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 NHLRC2Q8NBF2 726 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 SNRNP40Q96DI7 357 aaKnown RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 ABHD17AQ96GS6 310 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 CELSR1Q9NYQ6 3014 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TRBV24-1A0A075B6N3 115 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 ODAMA1E959 279 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TOX4O94842 621 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF83P51522 516 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 TNFRSF9Q07011 255 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
LINC00661-204ENST00000549354 OR2T10Q8NGZ9 312 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 RND1Q92730 232 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 SRD5A3Q9H8P0 318 aa9.23□□□□□ -0.93
LINC00661-204ENST00000549354 M0R1X1 148 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 TCAPO15273 167 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 GFRA3O60609 400 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 KBTBD11O94819 623 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 HAND1O96004 215 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 REG1BP48304 166 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 DLX1P56177 255 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 PAX5Q02548 391 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 SPRNQ5BIV9 151 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 DUX4L9Q6RFH8 374 aaPredicted RBP9.22□□□□□ -0.93
LINC00661-204ENST00000549354 MOB3BQ86TA1 216 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF114Q8NC26 417 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 MBD3L1Q8WWY6 194 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 GALMQ96C23 342 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 OPN3Q9H1Y3 402 aaPredicted RBP9.22□□□□□ -0.93
LINC00661-204ENST00000549354 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 A0A1W2PPV4 95 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 A8MWP6 167 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 NPPCP23582 126 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 BHLHA15Q7RTS1 189 aaPredicted RBP9.22□□□□□ -0.93
LINC00661-204ENST00000549354 Q8NA96 180 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 OR10P1Q8NGE3 313 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
LINC00661-204ENST00000549354 ANKHD1Q8IWZ3 2542 aaKnown RBP9.22□□□□□ -0.93
LINC00661-204ENST00000549354 IGHV3-21A0A0B4J1V1 117 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 LRP5LA4QPB2 252 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 LINC00473A8K010 186 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 SLC17A3O00476 420 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 FRMD6-AS1P0C7T7 363 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 PRAMEF5Q5TYX0 476 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 MIC13Q5XKP0 118 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF705AQ6ZN79 300 aaPredicted RBP9.21□□□□□ -0.93
LINC00661-204ENST00000549354 SFXN3Q9BWM7 321 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 LIN7CQ9NUP9 197 aaKnown RBP9.21□□□□□ -0.93
LINC00661-204ENST00000549354 TP53TG5Q9Y2B4 290 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 TRAV1-1A0A0B4J248 108 aa9.21□□□□□ -0.93
LINC00661-204ENST00000549354 SH2D1BO14796 132 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms