RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 AKR1C8PQ5T2L2 129 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 TCF23Q7RTU1 214 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 CT45A3Q8NHU0 189 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 CORO2AQ92828 525 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 RAB1BQ9H0U4 201 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 FN1P02751 2386 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 ZNF729A6NN14 1252 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 FAM157AC9JC47 383 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 RBMXL2O75526 392 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 FCN3O75636 299 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 CLEC12BQ2HXU8 276 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 PRSS57Q6UWY2 283 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 TMEM14EPQ6UXP3 125 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 LILRB2Q8N423 598 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 SCRT1Q9BWW7 348 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 EIF5A2Q9GZV4 153 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
CHMP1A-204ENST00000547687 A0A1B0GV50 99 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 F12P00748 615 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 NDUFB7P17568 137 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 NFYBP25208 207 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 LFNGQ8NES3 379 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 S1PR3Q99500 378 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 SLC25A10Q9UBX3 287 aaPredicted RBP13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 PRELID3BQ9Y3B1 194 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 YLPM1P49750 1951 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 A0A1W2PPE3 182 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 SNAPINO95295 136 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 DTD1Q8TEA8 209 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 LINC00574Q9H8X3 128 aa13.54□□□□□ -0.24
CHMP1A-204ENST00000547687 hADV38S2A0JD32 116 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 FAM74A7A6NL05 159 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 RBFOX2O43251 390 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■□□□□ 8.3
CHMP1A-204ENST00000547687 H2AFB1P0C5Y9 115 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 FAM74A3Q4VXF1 159 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 C1orf229Q6ZS94 237 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 CIB3Q96Q77 187 aaPredicted RBP13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 OR4C12Q96R67 309 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 CTSZQ9UBR2 303 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 CUBNO60494 3623 aa13.53□□□□□ -0.24
CHMP1A-204ENST00000547687 CEBPZOSA8MTT3 80 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 RNF223E7ERA6 249 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 GPR37O15354 613 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 PPT1P50897 306 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 ZDHHC16Q969W1 377 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.24
CHMP1A-204ENST00000547687 ANK3Q12955 4377 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 FAM90A9PA6NNJ1 464 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 LY6G6DO95868 133 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 OR8U8P0C7N1 319 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 OR9G9P0C7N8 305 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 CCL20P78556 96 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 TMEM30BQ3MIR4 351 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 ZNF439Q8NDP4 499 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 RSG1Q9BU20 258 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 QTRT1Q9BXR0 403 aaKnown RBP13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 PARD6GQ9BYG4 376 aaPredicted RBP13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 KAAG1Q9UBP8 84 aa13.52□□□□□ -0.25
CHMP1A-204ENST00000547687 HIVEP2P31629 2446 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 JMJD1CQ15652 2540 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 SAA2-SAA4A0A096LPE2 208 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 A0A1B0GW64 132 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 BTBD17A6NE02 478 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 NDUFB3O43676 98 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 MMP23AO75900 390 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 SAA2P0DJI9 122 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 ERVK-16P61578 105 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 MRPS11P82912 194 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 PRAMEF5Q5TYX0 476 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 LYG1Q8N1E2 194 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 DDB2Q92466 427 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 WDR61Q9GZS3 305 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 KPTNQ9Y664 436 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 LINC00312Q9Y6C7 94 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 DVL1O14640 695 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 NDUFA2O43678 99 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 NQO2P16083 231 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 NPBWR1P48145 328 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 GNG10P50151 68 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 MEF2CQ06413 473 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 ATP6V1FQ16864 119 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 LRRC10Q5BKY1 277 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 SPINK9Q5DT21 86 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 OR4A16Q8NH70 328 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 SFT2D1Q8WV19 159 aa13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 NEU4Q8WWR8 484 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-204ENST00000547687 PSMG3Q9BT73 122 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms