RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
SCAF11-208ENST00000546534 OR10J5Q8NHC4 309 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 EEF1AKMT3Q96AZ1 226 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 ADTRPQ96IZ2 230 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 RARRES2Q99969 163 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 CABLES2Q9BTV7 478 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 PECRQ9BY49 303 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 C5orf66Q9H5L9 145 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 APLNQ9ULZ1 77 aa9.37□□□□□ -0.91
SCAF11-208ENST00000546534 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
SCAF11-208ENST00000546534 TRBV6-7A0A0A0MS04 114 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 A0A1B0GW64 132 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 DPPA5A6NC42 116 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 TSPAN4O14817 238 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 RGS13O14921 159 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 AREGP15514 252 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 GALP22466 123 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 RASSF2P50749 326 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 ST3GAL4Q11206 333 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 MED22Q15528 200 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 OR6M1Q8NGM8 313 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 OR5B3Q8NH48 314 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 GALNT14Q96FL9 552 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 C9orf16Q9BUW7 83 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 SLC2A9Q9NRM0 540 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 UFC1Q9Y3C8 167 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 MUC4Q99102 2169 aa9.36□□□□□ -0.91
SCAF11-208ENST00000546534 EFCAB10A6NFE3 127 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 IGLL5B9A064 214 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 CRYGCP07315 174 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 PSMB6P28072 239 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 RPL27AP46776 148 aaKnown RBP9.35□□□□□ -0.91
SCAF11-208ENST00000546534 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
SCAF11-208ENST00000546534 P2RY14Q15391 338 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 PLAC9Q5JTB6 97 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 SETD9Q8NE22 299 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 FYTTD1Q96QD9 318 aaKnown RBP9.35□□□□□ -0.91
SCAF11-208ENST00000546534 DCUN1D5Q9BTE7 237 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 OR51E2Q9H255 320 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
SCAF11-208ENST00000546534 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
SCAF11-208ENST00000546534 TRBV7-1A0A0A6YYK4 115 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 DEFB4AO15263 64 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 FCGR3BO75015 233 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 MYOD1P15172 320 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 GPR183P32249 361 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 MFAP2P55001 183 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 APRG1Q8IVJ8 170 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 Q8N3U1 123 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 MAFIPQ8WZ33 124 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 KCNK7Q9Y2U2 307 aa9.34□□□□□ -0.91
SCAF11-208ENST00000546534 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 MPTX1A8MV57 137 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 DIRAS3O95661 229 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 DHFRP00374 187 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 REG1AP05451 166 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 FCGR3AP08637 254 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 HIST1H1BP16401 226 aaKnown RBP9.33□□□□□ -0.92
SCAF11-208ENST00000546534 WNT4P56705 351 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 ZFP1Q6P2D0 407 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 CXorf58Q96LI9 332 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 GINS4Q9BRT9 223 aa9.33□□□□□ -0.92
SCAF11-208ENST00000546534 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 KBTBD11O94819 623 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 DEFA4P12838 97 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 RPA2P15927 270 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 PSMD7P51665 324 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 RPL30P62888 115 aaKnown RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 MRPS15P82914 257 aaKnown RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 ZNF124Q15973 351 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 HSD17B12Q53GQ0 312 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 PLET1Q6UQ28 207 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 H1FOOQ8IZA3 346 aaPredicted RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 MS4A15Q8N5U1 240 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 OR56B1Q8NGI3 324 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 TMEM167AQ8TBQ9 72 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 OR2A7Q96R45 310 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 GFI1Q99684 422 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 ZNF436Q9C0F3 470 aaPredicted RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 C6orf62Q9GZU0 229 aaPredicted RBP9.32□□□□□ -0.92
SCAF11-208ENST00000546534 PLGRKTQ9HBL7 147 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms